Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Q3KNL4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q3KNL4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q3KNL4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q3KNL4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Q3KNL4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.36■□□□□ 0.69
Q3KNL4 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.35■□□□□ 0.69
Q3KNL4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q3KNL4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q3KNL4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q3KNL4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q3KNL4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q3KNL4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q3KNL4 Gm7417-201ENSMUST00000192950 473 ntBASIC19.35■□□□□ 0.69
Q3KNL4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.35■□□□□ 0.69
Q3KNL4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q3KNL4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Q3KNL4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Q3KNL4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Q3KNL4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Q3KNL4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q3KNL4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q3KNL4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.35■□□□□ 0.69
Q3KNL4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Q3KNL4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q3KNL4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q3KNL4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q3KNL4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q3KNL4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q3KNL4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.34■□□□□ 0.69
Q3KNL4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q3KNL4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q3KNL4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Q3KNL4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q3KNL4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.34■□□□□ 0.69
Q3KNL4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q3KNL4 Golph3-202ENSMUST00000226517 2359 ntBASIC19.34■□□□□ 0.69
Q3KNL4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q3KNL4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q3KNL4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Q3KNL4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Q3KNL4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Q3KNL4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Q3KNL4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Q3KNL4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q3KNL4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q3KNL4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q3KNL4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q3KNL4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Q3KNL4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q3KNL4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Q3KNL4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Q3KNL4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
Q3KNL4 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.33■□□□□ 0.68
Q3KNL4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q3KNL4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q3KNL4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Q3KNL4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q3KNL4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q3KNL4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q3KNL4 Gm9870-201ENSMUST00000063874 645 ntBASIC19.32■□□□□ 0.68
Q3KNL4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q3KNL4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q3KNL4 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Q3KNL4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q3KNL4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q3KNL4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q3KNL4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q3KNL4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q3KNL4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Q3KNL4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q3KNL4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q3KNL4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Q3KNL4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Q3KNL4 Mir6236-201ENSMUST00000184437 123 ntBASIC19.31■□□□□ 0.68
Q3KNL4 Gm5812-201ENSMUST00000061073 957 ntBASIC19.31■□□□□ 0.68
Q3KNL4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q3KNL4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q3KNL4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q3KNL4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.31■□□□□ 0.68
Q3KNL4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Q3KNL4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q3KNL4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q3KNL4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Q3KNL4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.3■□□□□ 0.68
Q3KNL4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q3KNL4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q3KNL4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q3KNL4 Gm15546-201ENSMUST00000122095 826 ntBASIC19.3■□□□□ 0.68
Q3KNL4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.3■□□□□ 0.68
Q3KNL4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q3KNL4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q3KNL4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
Q3KNL4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q3KNL4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q3KNL4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q3KNL4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q3KNL4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q3KNL4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q3KNL4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms