Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nhej1Q3KNJ2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nhej1Q3KNJ2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Nhej1Q3KNJ2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Nhej1Q3KNJ2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Nhej1Q3KNJ2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nhej1Q3KNJ2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Nhej1Q3KNJ2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Nhej1Q3KNJ2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nhej1Q3KNJ2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nhej1Q3KNJ2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nhej1Q3KNJ2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nhej1Q3KNJ2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nhej1Q3KNJ2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nhej1Q3KNJ2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21■□□□□ 0.95
Nhej1Q3KNJ2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nhej1Q3KNJ2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Nhej1Q3KNJ2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nhej1Q3KNJ2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Nhej1Q3KNJ2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nhej1Q3KNJ2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nhej1Q3KNJ2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nhej1Q3KNJ2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nhej1Q3KNJ2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nhej1Q3KNJ2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.99■□□□□ 0.95
Nhej1Q3KNJ2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nhej1Q3KNJ2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nhej1Q3KNJ2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nhej1Q3KNJ2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nhej1Q3KNJ2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nhej1Q3KNJ2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.98■□□□□ 0.95
Nhej1Q3KNJ2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nhej1Q3KNJ2 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.98■□□□□ 0.95
Nhej1Q3KNJ2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.98■□□□□ 0.95
Nhej1Q3KNJ2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nhej1Q3KNJ2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nhej1Q3KNJ2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nhej1Q3KNJ2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nhej1Q3KNJ2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nhej1Q3KNJ2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nhej1Q3KNJ2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.97■□□□□ 0.95
Nhej1Q3KNJ2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nhej1Q3KNJ2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nhej1Q3KNJ2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nhej1Q3KNJ2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nhej1Q3KNJ2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nhej1Q3KNJ2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nhej1Q3KNJ2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nhej1Q3KNJ2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nhej1Q3KNJ2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nhej1Q3KNJ2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nhej1Q3KNJ2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nhej1Q3KNJ2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.96■□□□□ 0.95
Nhej1Q3KNJ2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.96■□□□□ 0.95
Nhej1Q3KNJ2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.96■□□□□ 0.95
Nhej1Q3KNJ2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Nhej1Q3KNJ2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Nhej1Q3KNJ2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.96■□□□□ 0.95
Nhej1Q3KNJ2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nhej1Q3KNJ2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Nhej1Q3KNJ2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nhej1Q3KNJ2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nhej1Q3KNJ2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.95
Nhej1Q3KNJ2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Nhej1Q3KNJ2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nhej1Q3KNJ2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.95■□□□□ 0.94
Nhej1Q3KNJ2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nhej1Q3KNJ2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nhej1Q3KNJ2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.95■□□□□ 0.94
Nhej1Q3KNJ2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nhej1Q3KNJ2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nhej1Q3KNJ2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nhej1Q3KNJ2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Nhej1Q3KNJ2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nhej1Q3KNJ2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.94■□□□□ 0.94
Nhej1Q3KNJ2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nhej1Q3KNJ2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nhej1Q3KNJ2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Nhej1Q3KNJ2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nhej1Q3KNJ2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Nhej1Q3KNJ2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
Nhej1Q3KNJ2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nhej1Q3KNJ2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nhej1Q3KNJ2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Nhej1Q3KNJ2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nhej1Q3KNJ2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.93■□□□□ 0.94
Nhej1Q3KNJ2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nhej1Q3KNJ2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.92■□□□□ 0.94
Nhej1Q3KNJ2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Nhej1Q3KNJ2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nhej1Q3KNJ2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nhej1Q3KNJ2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nhej1Q3KNJ2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nhej1Q3KNJ2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.91■□□□□ 0.94
Nhej1Q3KNJ2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nhej1Q3KNJ2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nhej1Q3KNJ2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nhej1Q3KNJ2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.91■□□□□ 0.94
Nhej1Q3KNJ2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nhej1Q3KNJ2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms