Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Spcs1-204ENSMUST00000226782 949 ntBASIC20.04■□□□□ 0.8
Cdh6P97326 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh6P97326 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh6P97326 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Cdh6P97326 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh6P97326 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh6P97326 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh6P97326 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cdh6P97326 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh6P97326 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh6P97326 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh6P97326 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh6P97326 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh6P97326 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh6P97326 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Cdh6P97326 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh6P97326 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cdh6P97326 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cdh6P97326 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cdh6P97326 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cdh6P97326 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh6P97326 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh6P97326 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh6P97326 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Cdh6P97326 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh6P97326 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Cdh6P97326 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh6P97326 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh6P97326 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh6P97326 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh6P97326 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh6P97326 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdh6P97326 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdh6P97326 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Cdh6P97326 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Cdh6P97326 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cdh6P97326 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cdh6P97326 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdh6P97326 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Cdh6P97326 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cdh6P97326 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cdh6P97326 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdh6P97326 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Cdh6P97326 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20■□□□□ 0.79
Cdh6P97326 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20■□□□□ 0.79
Cdh6P97326 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20■□□□□ 0.79
Cdh6P97326 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdh6P97326 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Cdh6P97326 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20■□□□□ 0.79
Cdh6P97326 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Cdh6P97326 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdh6P97326 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdh6P97326 Mir7075-201ENSMUST00000184187 82 ntBASIC19.99■□□□□ 0.79
Cdh6P97326 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.99■□□□□ 0.79
Cdh6P97326 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdh6P97326 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cdh6P97326 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh6P97326 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh6P97326 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh6P97326 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh6P97326 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Cdh6P97326 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh6P97326 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh6P97326 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh6P97326 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh6P97326 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.98■□□□□ 0.79
Cdh6P97326 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh6P97326 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh6P97326 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh6P97326 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh6P97326 Gm12251-201ENSMUST00000117893 792 ntBASIC19.97■□□□□ 0.79
Cdh6P97326 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.97■□□□□ 0.79
Cdh6P97326 Gm45417-201ENSMUST00000209533 758 ntBASIC19.97■□□□□ 0.79
Cdh6P97326 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh6P97326 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh6P97326 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh6P97326 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.97■□□□□ 0.79
Cdh6P97326 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Cdh6P97326 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh6P97326 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.96■□□□□ 0.79
Cdh6P97326 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cdh6P97326 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh6P97326 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh6P97326 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.96■□□□□ 0.79
Cdh6P97326 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh6P97326 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh6P97326 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh6P97326 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh6P97326 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh6P97326 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Cdh6P97326 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh6P97326 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh6P97326 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh6P97326 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Cdh6P97326 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh6P97326 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh6P97326 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Cdh6P97326 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh6P97326 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh6P97326 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms