Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.57■□□□□ 0.4
H3f3aP84244 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.57■□□□□ 0.4
H3f3aP84244 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
H3f3aP84244 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H3f3aP84244 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H3f3aP84244 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.57■□□□□ 0.4
H3f3aP84244 Gm12251-201ENSMUST00000117893 792 ntBASIC17.57■□□□□ 0.4
H3f3aP84244 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.57■□□□□ 0.4
H3f3aP84244 Gm45417-201ENSMUST00000209533 758 ntBASIC17.57■□□□□ 0.4
H3f3aP84244 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.57■□□□□ 0.4
H3f3aP84244 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
H3f3aP84244 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.57■□□□□ 0.4
H3f3aP84244 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
H3f3aP84244 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H3f3aP84244 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
H3f3aP84244 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
H3f3aP84244 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
H3f3aP84244 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
H3f3aP84244 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
H3f3aP84244 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
H3f3aP84244 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
H3f3aP84244 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H3f3aP84244 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
H3f3aP84244 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H3f3aP84244 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H3f3aP84244 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
H3f3aP84244 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.56■□□□□ 0.4
H3f3aP84244 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.56■□□□□ 0.4
H3f3aP84244 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
H3f3aP84244 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H3f3aP84244 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
H3f3aP84244 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H3f3aP84244 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
H3f3aP84244 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
H3f3aP84244 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H3f3aP84244 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.55■□□□□ 0.4
H3f3aP84244 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
H3f3aP84244 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
H3f3aP84244 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
H3f3aP84244 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H3f3aP84244 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
H3f3aP84244 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H3f3aP84244 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
H3f3aP84244 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H3f3aP84244 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
H3f3aP84244 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H3f3aP84244 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H3f3aP84244 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
H3f3aP84244 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
H3f3aP84244 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
H3f3aP84244 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H3f3aP84244 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H3f3aP84244 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.54■□□□□ 0.4
H3f3aP84244 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
H3f3aP84244 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H3f3aP84244 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
H3f3aP84244 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
H3f3aP84244 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
H3f3aP84244 Gm6139-201ENSMUST00000079261 882 ntBASIC17.54■□□□□ 0.4
H3f3aP84244 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
H3f3aP84244 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
H3f3aP84244 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H3f3aP84244 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H3f3aP84244 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
H3f3aP84244 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
H3f3aP84244 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H3f3aP84244 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H3f3aP84244 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.53■□□□□ 0.4
H3f3aP84244 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
H3f3aP84244 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H3f3aP84244 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
H3f3aP84244 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.53■□□□□ 0.4
H3f3aP84244 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H3f3aP84244 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
H3f3aP84244 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H3f3aP84244 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.52■□□□□ 0.4
H3f3aP84244 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
H3f3aP84244 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.52■□□□□ 0.4
H3f3aP84244 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H3f3aP84244 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
H3f3aP84244 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.52■□□□□ 0.4
H3f3aP84244 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.52■□□□□ 0.4
H3f3aP84244 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
H3f3aP84244 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
H3f3aP84244 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
H3f3aP84244 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
H3f3aP84244 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
H3f3aP84244 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
H3f3aP84244 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
H3f3aP84244 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
H3f3aP84244 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3f3aP84244 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3f3aP84244 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
H3f3aP84244 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3f3aP84244 Gm43173-201ENSMUST00000202246 593 ntBASIC17.51■□□□□ 0.39
H3f3aP84244 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3f3aP84244 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3f3aP84244 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3f3aP84244 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3f3aP84244 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms