Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.39■□□□□ 0.69
Traf6P70196 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.39■□□□□ 0.69
Traf6P70196 Etf1-202ENSMUST00000180351 108 ntBASIC19.39■□□□□ 0.69
Traf6P70196 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Traf6P70196 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Traf6P70196 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Traf6P70196 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Traf6P70196 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Traf6P70196 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.39■□□□□ 0.69
Traf6P70196 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Traf6P70196 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Traf6P70196 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.38■□□□□ 0.69
Traf6P70196 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.38■□□□□ 0.69
Traf6P70196 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.38■□□□□ 0.69
Traf6P70196 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Traf6P70196 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Traf6P70196 Gm9870-201ENSMUST00000063874 645 ntBASIC19.38■□□□□ 0.69
Traf6P70196 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Traf6P70196 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Traf6P70196 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Traf6P70196 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Traf6P70196 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Traf6P70196 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Traf6P70196 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Traf6P70196 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Traf6P70196 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.37■□□□□ 0.69
Traf6P70196 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Traf6P70196 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Traf6P70196 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Traf6P70196 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.36■□□□□ 0.69
Traf6P70196 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Traf6P70196 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Traf6P70196 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Traf6P70196 Gm43530-201ENSMUST00000195920 274 ntBASIC19.36■□□□□ 0.69
Traf6P70196 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Traf6P70196 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Traf6P70196 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.36■□□□□ 0.69
Traf6P70196 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Traf6P70196 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Traf6P70196 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.35■□□□□ 0.69
Traf6P70196 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Traf6P70196 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Traf6P70196 Gm7417-201ENSMUST00000192950 473 ntBASIC19.35■□□□□ 0.69
Traf6P70196 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Traf6P70196 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Traf6P70196 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Traf6P70196 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Traf6P70196 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Traf6P70196 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Traf6P70196 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Traf6P70196 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Traf6P70196 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.34■□□□□ 0.69
Traf6P70196 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Traf6P70196 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Traf6P70196 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Traf6P70196 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Traf6P70196 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.33■□□□□ 0.69
Traf6P70196 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Traf6P70196 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Traf6P70196 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.33■□□□□ 0.68
Traf6P70196 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Traf6P70196 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Traf6P70196 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Traf6P70196 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
Traf6P70196 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Traf6P70196 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Traf6P70196 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Traf6P70196 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Traf6P70196 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.32■□□□□ 0.68
Traf6P70196 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Traf6P70196 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.32■□□□□ 0.68
Traf6P70196 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Traf6P70196 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Traf6P70196 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Traf6P70196 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Traf6P70196 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Traf6P70196 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Traf6P70196 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Traf6P70196 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Traf6P70196 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Traf6P70196 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.31■□□□□ 0.68
Traf6P70196 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Traf6P70196 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.31■□□□□ 0.68
Traf6P70196 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Traf6P70196 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Traf6P70196 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Traf6P70196 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Traf6P70196 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Traf6P70196 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Traf6P70196 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Traf6P70196 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.3■□□□□ 0.68
Traf6P70196 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Traf6P70196 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.3■□□□□ 0.68
Traf6P70196 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.3■□□□□ 0.68
Traf6P70196 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Traf6P70196 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Traf6P70196 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Traf6P70196 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Traf6P70196 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Traf6P70196 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms