Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1bP61025 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cks1bP61025 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1bP61025 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1bP61025 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cks1bP61025 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1bP61025 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1bP61025 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1bP61025 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1bP61025 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1bP61025 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1bP61025 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1bP61025 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1bP61025 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1bP61025 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1bP61025 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1bP61025 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1bP61025 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1bP61025 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cks1bP61025 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1bP61025 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1bP61025 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cks1bP61025 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1bP61025 Gm5987-201ENSMUST00000196433 1151 ntBASIC13.96□□□□□ -0.17
Cks1bP61025 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cks1bP61025 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Cks1bP61025 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cks1bP61025 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC13.96□□□□□ -0.18
Cks1bP61025 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cks1bP61025 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1bP61025 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1bP61025 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1bP61025 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1bP61025 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1bP61025 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cks1bP61025 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1bP61025 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1bP61025 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1bP61025 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC13.95□□□□□ -0.18
Cks1bP61025 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1bP61025 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1bP61025 Gm5913-201ENSMUST00000119397 1399 ntBASIC13.95□□□□□ -0.18
Cks1bP61025 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cks1bP61025 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cks1bP61025 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cks1bP61025 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cks1bP61025 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cks1bP61025 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cks1bP61025 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC13.94□□□□□ -0.18
Cks1bP61025 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.94□□□□□ -0.18
Cks1bP61025 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cks1bP61025 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cks1bP61025 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cks1bP61025 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cks1bP61025 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cks1bP61025 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cks1bP61025 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1bP61025 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cks1bP61025 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1bP61025 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1bP61025 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1bP61025 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1bP61025 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1bP61025 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1bP61025 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1bP61025 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1bP61025 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1bP61025 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1bP61025 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cks1bP61025 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.93□□□□□ -0.18
Cks1bP61025 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
Cks1bP61025 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1bP61025 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1bP61025 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1bP61025 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Cks1bP61025 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1bP61025 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1bP61025 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1bP61025 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cks1bP61025 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1bP61025 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1bP61025 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Cks1bP61025 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1bP61025 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1bP61025 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC13.92□□□□□ -0.18
Cks1bP61025 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1bP61025 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cks1bP61025 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cks1bP61025 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1bP61025 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1bP61025 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cks1bP61025 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1bP61025 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC13.91□□□□□ -0.18
Cks1bP61025 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1bP61025 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1bP61025 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1bP61025 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1bP61025 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Cks1bP61025 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cks1bP61025 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms