Protein–RNA interactions for Protein: P56716

Rp1, Oxygen-regulated protein 1, mousemouse

Predictions only

Length 2,095 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1P56716 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rp1P56716 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rp1P56716 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Rp1P56716 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rp1P56716 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Rp1P56716 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rp1P56716 Gm12441-201ENSMUST00000121806 588 ntBASIC20.38■□□□□ 0.85
Rp1P56716 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.38■□□□□ 0.85
Rp1P56716 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Rp1P56716 Gm10602-201ENSMUST00000098239 609 ntBASIC20.38■□□□□ 0.85
Rp1P56716 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rp1P56716 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rp1P56716 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rp1P56716 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rp1P56716 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rp1P56716 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rp1P56716 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.37■□□□□ 0.85
Rp1P56716 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rp1P56716 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rp1P56716 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rp1P56716 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rp1P56716 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rp1P56716 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rp1P56716 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rp1P56716 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rp1P56716 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Rp1P56716 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.36■□□□□ 0.85
Rp1P56716 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rp1P56716 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.36■□□□□ 0.85
Rp1P56716 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rp1P56716 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Rp1P56716 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rp1P56716 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rp1P56716 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rp1P56716 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Rp1P56716 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rp1P56716 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rp1P56716 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rp1P56716 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.34■□□□□ 0.85
Rp1P56716 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rp1P56716 Gm4968-201ENSMUST00000071458 858 ntBASIC20.34■□□□□ 0.85
Rp1P56716 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rp1P56716 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rp1P56716 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.34■□□□□ 0.85
Rp1P56716 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rp1P56716 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Rp1P56716 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rp1P56716 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.34■□□□□ 0.85
Rp1P56716 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rp1P56716 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rp1P56716 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rp1P56716 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rp1P56716 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Rp1P56716 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.33■□□□□ 0.85
Rp1P56716 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.33■□□□□ 0.85
Rp1P56716 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.33■□□□□ 0.85
Rp1P56716 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rp1P56716 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rp1P56716 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.33■□□□□ 0.85
Rp1P56716 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rp1P56716 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rp1P56716 Mir5133-201ENSMUST00000174955 77 ntBASIC20.33■□□□□ 0.84
Rp1P56716 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rp1P56716 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rp1P56716 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rp1P56716 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rp1P56716 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.32■□□□□ 0.84
Rp1P56716 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.32■□□□□ 0.84
Rp1P56716 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rp1P56716 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rp1P56716 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.32■□□□□ 0.84
Rp1P56716 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rp1P56716 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.31■□□□□ 0.84
Rp1P56716 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Rp1P56716 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rp1P56716 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rp1P56716 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rp1P56716 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rp1P56716 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rp1P56716 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rp1P56716 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rp1P56716 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rp1P56716 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.3■□□□□ 0.84
Rp1P56716 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rp1P56716 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rp1P56716 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
Rp1P56716 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.3■□□□□ 0.84
Rp1P56716 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rp1P56716 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rp1P56716 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.29■□□□□ 0.84
Rp1P56716 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.29■□□□□ 0.84
Rp1P56716 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Rp1P56716 Nespas-201ENSMUST00000143738 1083 ntBASIC20.29■□□□□ 0.84
Rp1P56716 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rp1P56716 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rp1P56716 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rp1P56716 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rp1P56716 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rp1P56716 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rp1P56716 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms