Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lim2P56563 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lim2P56563 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
Lim2P56563 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lim2P56563 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lim2P56563 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lim2P56563 Golph3-202ENSMUST00000226517 2359 ntBASIC19.77■□□□□ 0.76
Lim2P56563 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lim2P56563 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lim2P56563 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lim2P56563 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lim2P56563 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lim2P56563 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Lim2P56563 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Lim2P56563 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lim2P56563 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lim2P56563 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.76■□□□□ 0.75
Lim2P56563 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lim2P56563 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lim2P56563 Gm15039-201ENSMUST00000118914 875 ntBASIC19.76■□□□□ 0.75
Lim2P56563 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.76■□□□□ 0.75
Lim2P56563 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lim2P56563 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lim2P56563 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Lim2P56563 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Lim2P56563 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lim2P56563 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lim2P56563 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lim2P56563 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lim2P56563 Gm6139-201ENSMUST00000079261 882 ntBASIC19.75■□□□□ 0.75
Lim2P56563 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lim2P56563 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lim2P56563 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lim2P56563 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lim2P56563 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lim2P56563 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lim2P56563 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lim2P56563 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Lim2P56563 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Lim2P56563 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lim2P56563 Gm12251-201ENSMUST00000117893 792 ntBASIC19.74■□□□□ 0.75
Lim2P56563 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Lim2P56563 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lim2P56563 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.74■□□□□ 0.75
Lim2P56563 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Lim2P56563 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lim2P56563 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lim2P56563 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lim2P56563 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.73■□□□□ 0.75
Lim2P56563 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lim2P56563 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lim2P56563 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lim2P56563 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Lim2P56563 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lim2P56563 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lim2P56563 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lim2P56563 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.73■□□□□ 0.75
Lim2P56563 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Lim2P56563 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lim2P56563 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lim2P56563 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lim2P56563 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Lim2P56563 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lim2P56563 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.73■□□□□ 0.75
Lim2P56563 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lim2P56563 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lim2P56563 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lim2P56563 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lim2P56563 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lim2P56563 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lim2P56563 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Lim2P56563 Gm8493-201ENSMUST00000196881 489 ntBASIC19.72■□□□□ 0.75
Lim2P56563 Spcs1-204ENSMUST00000226782 949 ntBASIC19.72■□□□□ 0.75
Lim2P56563 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lim2P56563 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lim2P56563 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.72■□□□□ 0.75
Lim2P56563 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lim2P56563 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Lim2P56563 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lim2P56563 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.71■□□□□ 0.75
Lim2P56563 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lim2P56563 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lim2P56563 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.71■□□□□ 0.75
Lim2P56563 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lim2P56563 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Lim2P56563 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lim2P56563 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Lim2P56563 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lim2P56563 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.71■□□□□ 0.75
Lim2P56563 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lim2P56563 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lim2P56563 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.7■□□□□ 0.74
Lim2P56563 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lim2P56563 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Lim2P56563 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.7■□□□□ 0.74
Lim2P56563 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.7■□□□□ 0.74
Lim2P56563 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lim2P56563 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lim2P56563 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lim2P56563 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms