Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.74
CLTCL1P53675 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC32.19■■■□□ 2.74
CLTCL1P53675 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CLTCL1P53675 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CLTCL1P53675 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
CLTCL1P53675 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
CLTCL1P53675 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC32.18■■■□□ 2.74
CLTCL1P53675 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC32.18■■■□□ 2.74
CLTCL1P53675 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
CLTCL1P53675 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC32.18■■■□□ 2.74
CLTCL1P53675 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
CLTCL1P53675 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
CLTCL1P53675 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC32.18■■■□□ 2.74
CLTCL1P53675 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
CLTCL1P53675 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC32.18■■■□□ 2.74
CLTCL1P53675 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC32.17■■■□□ 2.74
CLTCL1P53675 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
CLTCL1P53675 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC32.17■■■□□ 2.74
CLTCL1P53675 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
CLTCL1P53675 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
CLTCL1P53675 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
CLTCL1P53675 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC32.16■■■□□ 2.74
CLTCL1P53675 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC32.16■■■□□ 2.74
CLTCL1P53675 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
CLTCL1P53675 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC32.16■■■□□ 2.74
CLTCL1P53675 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC32.16■■■□□ 2.74
CLTCL1P53675 AC004812.2-201ENST00000611079 2094 ntBASIC32.16■■■□□ 2.74
CLTCL1P53675 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
CLTCL1P53675 H19-210ENST00000439725 1929 ntTSL 2 BASIC32.15■■■□□ 2.74
CLTCL1P53675 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
CLTCL1P53675 LINC01124-201ENST00000409786 2117 ntBASIC32.15■■■□□ 2.74
CLTCL1P53675 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC32.15■■■□□ 2.74
CLTCL1P53675 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC32.15■■■□□ 2.74
CLTCL1P53675 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC32.15■■■□□ 2.74
CLTCL1P53675 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC32.15■■■□□ 2.74
CLTCL1P53675 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
CLTCL1P53675 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC32.15■■■□□ 2.74
CLTCL1P53675 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC32.15■■■□□ 2.74
CLTCL1P53675 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
CLTCL1P53675 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
CLTCL1P53675 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
CLTCL1P53675 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
CLTCL1P53675 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
CLTCL1P53675 AC105233.4-201ENST00000642045 216 ntBASIC32.14■■■□□ 2.74
CLTCL1P53675 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC32.14■■■□□ 2.74
CLTCL1P53675 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
CLTCL1P53675 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC32.13■■■□□ 2.73
CLTCL1P53675 MPST-204ENST00000404393 1329 ntTSL 5 BASIC32.13■■■□□ 2.73
CLTCL1P53675 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC32.13■■■□□ 2.73
CLTCL1P53675 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
CLTCL1P53675 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC32.13■■■□□ 2.73
CLTCL1P53675 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC32.13■■■□□ 2.73
CLTCL1P53675 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
CLTCL1P53675 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC32.13■■■□□ 2.73
CLTCL1P53675 AL139125.2-201ENST00000623134 1869 ntBASIC32.12■■■□□ 2.73
CLTCL1P53675 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CLTCL1P53675 AC004687.1-201ENST00000579003 1625 ntBASIC32.12■■■□□ 2.73
CLTCL1P53675 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC32.12■■■□□ 2.73
CLTCL1P53675 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
CLTCL1P53675 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC32.12■■■□□ 2.73
CLTCL1P53675 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CLTCL1P53675 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC32.11■■■□□ 2.73
CLTCL1P53675 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC32.11■■■□□ 2.73
CLTCL1P53675 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC32.11■■■□□ 2.73
CLTCL1P53675 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC32.11■■■□□ 2.73
CLTCL1P53675 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
CLTCL1P53675 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC32.1■■■□□ 2.73
CLTCL1P53675 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC32.1■■■□□ 2.73
CLTCL1P53675 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
CLTCL1P53675 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC32.1■■■□□ 2.73
CLTCL1P53675 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC32.1■■■□□ 2.73
CLTCL1P53675 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
CLTCL1P53675 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
CLTCL1P53675 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
CLTCL1P53675 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
CLTCL1P53675 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC32.1■■■□□ 2.73
CLTCL1P53675 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CLTCL1P53675 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC32.09■■■□□ 2.73
CLTCL1P53675 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC32.09■■■□□ 2.73
CLTCL1P53675 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CLTCL1P53675 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CLTCL1P53675 MFF-208ENST00000409616 1247 ntTSL 5 BASIC32.09■■■□□ 2.73
CLTCL1P53675 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC32.09■■■□□ 2.73
CLTCL1P53675 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CLTCL1P53675 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CLTCL1P53675 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CLTCL1P53675 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC32.08■■■□□ 2.73
CLTCL1P53675 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC32.08■■■□□ 2.73
CLTCL1P53675 AC004911.1-201ENST00000416316 871 ntBASIC32.08■■■□□ 2.73
CLTCL1P53675 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC32.08■■■□□ 2.73
CLTCL1P53675 DLX3-202ENST00000512495 834 ntTSL 2 BASIC32.08■■■□□ 2.73
CLTCL1P53675 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC32.08■■■□□ 2.73
CLTCL1P53675 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
CLTCL1P53675 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CLTCL1P53675 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
CLTCL1P53675 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC32.08■■■□□ 2.73
CLTCL1P53675 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CLTCL1P53675 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC32.08■■■□□ 2.73
CLTCL1P53675 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC32.08■■■□□ 2.73
CLTCL1P53675 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC32.08■■■□□ 2.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms