Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Limk1P53668 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Limk1P53668 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Limk1P53668 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Limk1P53668 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Limk1P53668 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Limk1P53668 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Limk1P53668 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Limk1P53668 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.31■□□□□ 0.68
Limk1P53668 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Limk1P53668 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Limk1P53668 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Limk1P53668 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Limk1P53668 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Limk1P53668 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Limk1P53668 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Limk1P53668 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Limk1P53668 Mir7071-201ENSMUST00000184847 69 ntBASIC19.31■□□□□ 0.68
Limk1P53668 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.31■□□□□ 0.68
Limk1P53668 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Limk1P53668 Gm7514-201ENSMUST00000209475 934 ntBASIC19.31■□□□□ 0.68
Limk1P53668 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
Limk1P53668 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Limk1P53668 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Limk1P53668 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Limk1P53668 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Limk1P53668 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Limk1P53668 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Limk1P53668 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.3■□□□□ 0.68
Limk1P53668 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.3■□□□□ 0.68
Limk1P53668 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Limk1P53668 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Limk1P53668 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Limk1P53668 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Limk1P53668 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Limk1P53668 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Limk1P53668 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Limk1P53668 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Limk1P53668 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Limk1P53668 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Limk1P53668 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.29■□□□□ 0.68
Limk1P53668 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Limk1P53668 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Limk1P53668 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Limk1P53668 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Limk1P53668 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Limk1P53668 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Limk1P53668 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Limk1P53668 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Limk1P53668 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Limk1P53668 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Limk1P53668 Reep4-203ENSMUST00000226563 1444 ntBASIC19.28■□□□□ 0.68
Limk1P53668 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Limk1P53668 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Limk1P53668 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Limk1P53668 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Limk1P53668 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Limk1P53668 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Limk1P53668 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Limk1P53668 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Limk1P53668 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Limk1P53668 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Limk1P53668 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Limk1P53668 Gm12527-201ENSMUST00000117967 564 ntBASIC19.27■□□□□ 0.68
Limk1P53668 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Limk1P53668 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.27■□□□□ 0.68
Limk1P53668 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Limk1P53668 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.27■□□□□ 0.68
Limk1P53668 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Limk1P53668 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.27■□□□□ 0.68
Limk1P53668 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Limk1P53668 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Limk1P53668 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Limk1P53668 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Limk1P53668 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.26■□□□□ 0.67
Limk1P53668 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Limk1P53668 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Limk1P53668 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Limk1P53668 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Limk1P53668 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Limk1P53668 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Limk1P53668 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.25■□□□□ 0.67
Limk1P53668 Gm7977-201ENSMUST00000193787 748 ntBASIC19.25■□□□□ 0.67
Limk1P53668 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.25■□□□□ 0.67
Limk1P53668 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
Limk1P53668 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Limk1P53668 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Limk1P53668 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Limk1P53668 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Limk1P53668 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Limk1P53668 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
Limk1P53668 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Limk1P53668 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Limk1P53668 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.24■□□□□ 0.67
Limk1P53668 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Limk1P53668 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Limk1P53668 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Limk1P53668 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Limk1P53668 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Limk1P53668 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms