Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh2P43247 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh2P43247 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh2P43247 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.29■□□□□ 0.84
Msh2P43247 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh2P43247 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Msh2P43247 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Msh2P43247 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Msh2P43247 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Msh2P43247 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Msh2P43247 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.28■□□□□ 0.84
Msh2P43247 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Msh2P43247 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Msh2P43247 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Msh2P43247 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.27■□□□□ 0.84
Msh2P43247 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Msh2P43247 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Msh2P43247 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Msh2P43247 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.27■□□□□ 0.83
Msh2P43247 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Msh2P43247 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Msh2P43247 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Msh2P43247 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.26■□□□□ 0.83
Msh2P43247 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.26■□□□□ 0.83
Msh2P43247 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Msh2P43247 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Msh2P43247 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Msh2P43247 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Msh2P43247 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Msh2P43247 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.26■□□□□ 0.83
Msh2P43247 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Msh2P43247 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Msh2P43247 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Msh2P43247 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
Msh2P43247 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Msh2P43247 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Msh2P43247 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Msh2P43247 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Msh2P43247 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Msh2P43247 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Msh2P43247 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Msh2P43247 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Msh2P43247 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Msh2P43247 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Msh2P43247 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Msh2P43247 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
Msh2P43247 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Msh2P43247 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Msh2P43247 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Msh2P43247 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Msh2P43247 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Msh2P43247 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Msh2P43247 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Msh2P43247 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Msh2P43247 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Msh2P43247 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Msh2P43247 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Msh2P43247 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Msh2P43247 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.22■□□□□ 0.83
Msh2P43247 Golph3-205ENSMUST00000228671 2842 ntBASIC20.22■□□□□ 0.83
Msh2P43247 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Msh2P43247 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Msh2P43247 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.22■□□□□ 0.83
Msh2P43247 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Msh2P43247 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.22■□□□□ 0.83
Msh2P43247 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Msh2P43247 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Msh2P43247 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.21■□□□□ 0.83
Msh2P43247 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.21■□□□□ 0.83
Msh2P43247 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Msh2P43247 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Msh2P43247 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Msh2P43247 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Msh2P43247 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Msh2P43247 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Msh2P43247 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Msh2P43247 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Msh2P43247 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Msh2P43247 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Msh2P43247 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Msh2P43247 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Msh2P43247 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Msh2P43247 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Msh2P43247 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Msh2P43247 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Msh2P43247 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Msh2P43247 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Msh2P43247 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Msh2P43247 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Msh2P43247 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Msh2P43247 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Msh2P43247 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
Msh2P43247 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Msh2P43247 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Msh2P43247 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Msh2P43247 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.19■□□□□ 0.82
Msh2P43247 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Msh2P43247 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Msh2P43247 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Msh2P43247 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms