Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox6P40645 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sox6P40645 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.43■□□□□ 0.54
Sox6P40645 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sox6P40645 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox6P40645 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox6P40645 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox6P40645 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox6P40645 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox6P40645 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Sox6P40645 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Sox6P40645 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Sox6P40645 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Sox6P40645 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox6P40645 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox6P40645 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox6P40645 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Sox6P40645 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox6P40645 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox6P40645 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.41■□□□□ 0.54
Sox6P40645 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Sox6P40645 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox6P40645 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox6P40645 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox6P40645 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox6P40645 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Sox6P40645 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sox6P40645 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox6P40645 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sox6P40645 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.4■□□□□ 0.54
Sox6P40645 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Sox6P40645 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox6P40645 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox6P40645 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sox6P40645 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox6P40645 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox6P40645 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.4■□□□□ 0.54
Sox6P40645 Gm22238-201ENSMUST00000175222 88 ntBASIC18.4■□□□□ 0.54
Sox6P40645 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox6P40645 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox6P40645 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox6P40645 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.39■□□□□ 0.54
Sox6P40645 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.39■□□□□ 0.54
Sox6P40645 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sox6P40645 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Sox6P40645 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox6P40645 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox6P40645 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox6P40645 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox6P40645 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox6P40645 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sox6P40645 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox6P40645 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.39■□□□□ 0.53
Sox6P40645 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Sox6P40645 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sox6P40645 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox6P40645 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.39■□□□□ 0.53
Sox6P40645 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox6P40645 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.39■□□□□ 0.53
Sox6P40645 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.39■□□□□ 0.53
Sox6P40645 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox6P40645 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox6P40645 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Sox6P40645 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox6P40645 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.38■□□□□ 0.53
Sox6P40645 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Sox6P40645 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Sox6P40645 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Sox6P40645 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox6P40645 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sox6P40645 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox6P40645 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox6P40645 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sox6P40645 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sox6P40645 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox6P40645 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox6P40645 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox6P40645 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Sox6P40645 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sox6P40645 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sox6P40645 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox6P40645 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox6P40645 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sox6P40645 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sox6P40645 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox6P40645 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox6P40645 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox6P40645 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.36■□□□□ 0.53
Sox6P40645 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox6P40645 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.36■□□□□ 0.53
Sox6P40645 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox6P40645 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Sox6P40645 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox6P40645 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sox6P40645 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox6P40645 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox6P40645 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.35■□□□□ 0.53
Sox6P40645 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.35■□□□□ 0.53
Sox6P40645 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox6P40645 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms