Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col8a2P25318 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Col8a2P25318 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Col8a2P25318 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Col8a2P25318 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col8a2P25318 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.53■□□□□ 0.24
Col8a2P25318 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col8a2P25318 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col8a2P25318 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Col8a2P25318 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col8a2P25318 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col8a2P25318 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Col8a2P25318 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col8a2P25318 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
Col8a2P25318 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Col8a2P25318 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.52■□□□□ 0.23
Col8a2P25318 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.51■□□□□ 0.23
Col8a2P25318 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.51■□□□□ 0.23
Col8a2P25318 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col8a2P25318 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col8a2P25318 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.51■□□□□ 0.23
Col8a2P25318 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col8a2P25318 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Col8a2P25318 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col8a2P25318 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col8a2P25318 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col8a2P25318 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col8a2P25318 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.51■□□□□ 0.23
Col8a2P25318 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col8a2P25318 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col8a2P25318 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col8a2P25318 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Col8a2P25318 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col8a2P25318 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.5■□□□□ 0.23
Col8a2P25318 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col8a2P25318 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Col8a2P25318 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col8a2P25318 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col8a2P25318 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col8a2P25318 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col8a2P25318 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col8a2P25318 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Col8a2P25318 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col8a2P25318 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col8a2P25318 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col8a2P25318 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Col8a2P25318 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col8a2P25318 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.49■□□□□ 0.23
Col8a2P25318 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col8a2P25318 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col8a2P25318 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col8a2P25318 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col8a2P25318 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col8a2P25318 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col8a2P25318 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.49■□□□□ 0.23
Col8a2P25318 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col8a2P25318 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Col8a2P25318 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Col8a2P25318 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col8a2P25318 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.48■□□□□ 0.23
Col8a2P25318 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col8a2P25318 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col8a2P25318 Gm43060-201ENSMUST00000200621 289 ntBASIC16.48■□□□□ 0.23
Col8a2P25318 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col8a2P25318 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Col8a2P25318 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col8a2P25318 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col8a2P25318 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col8a2P25318 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Col8a2P25318 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col8a2P25318 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col8a2P25318 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col8a2P25318 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col8a2P25318 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.47■□□□□ 0.23
Col8a2P25318 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Col8a2P25318 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.47■□□□□ 0.23
Col8a2P25318 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Col8a2P25318 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col8a2P25318 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col8a2P25318 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col8a2P25318 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.47■□□□□ 0.23
Col8a2P25318 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.46■□□□□ 0.23
Col8a2P25318 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col8a2P25318 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col8a2P25318 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col8a2P25318 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col8a2P25318 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col8a2P25318 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col8a2P25318 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col8a2P25318 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.46■□□□□ 0.23
Col8a2P25318 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col8a2P25318 Gm18284-201ENSMUST00000172604 624 ntBASIC16.46■□□□□ 0.23
Col8a2P25318 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Col8a2P25318 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col8a2P25318 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col8a2P25318 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col8a2P25318 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Col8a2P25318 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col8a2P25318 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col8a2P25318 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms