Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ApoeP08226 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ApoeP08226 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.63■□□□□ 0.57
ApoeP08226 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ApoeP08226 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ApoeP08226 Gm7143-201ENSMUST00000222811 859 ntBASIC18.63■□□□□ 0.57
ApoeP08226 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ApoeP08226 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ApoeP08226 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ApoeP08226 Golph3-205ENSMUST00000228671 2842 ntBASIC18.63■□□□□ 0.57
ApoeP08226 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ApoeP08226 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ApoeP08226 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ApoeP08226 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ApoeP08226 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ApoeP08226 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ApoeP08226 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ApoeP08226 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ApoeP08226 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ApoeP08226 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ApoeP08226 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.62■□□□□ 0.57
ApoeP08226 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ApoeP08226 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ApoeP08226 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ApoeP08226 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ApoeP08226 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.61■□□□□ 0.57
ApoeP08226 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ApoeP08226 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ApoeP08226 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ApoeP08226 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ApoeP08226 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ApoeP08226 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ApoeP08226 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ApoeP08226 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ApoeP08226 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ApoeP08226 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ApoeP08226 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ApoeP08226 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.61■□□□□ 0.57
ApoeP08226 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ApoeP08226 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ApoeP08226 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ApoeP08226 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ApoeP08226 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ApoeP08226 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.6■□□□□ 0.57
ApoeP08226 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ApoeP08226 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ApoeP08226 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ApoeP08226 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ApoeP08226 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ApoeP08226 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ApoeP08226 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ApoeP08226 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ApoeP08226 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ApoeP08226 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ApoeP08226 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.59■□□□□ 0.57
ApoeP08226 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ApoeP08226 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ApoeP08226 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ApoeP08226 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ApoeP08226 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ApoeP08226 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ApoeP08226 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ApoeP08226 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.58■□□□□ 0.56
ApoeP08226 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ApoeP08226 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ApoeP08226 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ApoeP08226 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ApoeP08226 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ApoeP08226 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ApoeP08226 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ApoeP08226 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ApoeP08226 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ApoeP08226 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.57■□□□□ 0.56
ApoeP08226 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
ApoeP08226 Mir6236-201ENSMUST00000184437 123 ntBASIC18.57■□□□□ 0.56
ApoeP08226 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ApoeP08226 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ApoeP08226 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ApoeP08226 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ApoeP08226 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ApoeP08226 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ApoeP08226 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.56■□□□□ 0.56
ApoeP08226 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ApoeP08226 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ApoeP08226 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ApoeP08226 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ApoeP08226 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.56■□□□□ 0.56
ApoeP08226 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.56■□□□□ 0.56
ApoeP08226 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ApoeP08226 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
ApoeP08226 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.56■□□□□ 0.56
ApoeP08226 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ApoeP08226 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ApoeP08226 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ApoeP08226 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ApoeP08226 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ApoeP08226 Mir6538-201ENSMUST00000183713 110 ntBASIC18.55■□□□□ 0.56
ApoeP08226 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.55■□□□□ 0.56
ApoeP08226 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ApoeP08226 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms