Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.5■□□□□ 0.71
Hoxa4P06798 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxa4P06798 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Hoxa4P06798 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.5■□□□□ 0.71
Hoxa4P06798 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxa4P06798 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxa4P06798 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Hoxa4P06798 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxa4P06798 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.5■□□□□ 0.71
Hoxa4P06798 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxa4P06798 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxa4P06798 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxa4P06798 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxa4P06798 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxa4P06798 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxa4P06798 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxa4P06798 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.49■□□□□ 0.71
Hoxa4P06798 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxa4P06798 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxa4P06798 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxa4P06798 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxa4P06798 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.48■□□□□ 0.71
Hoxa4P06798 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.48■□□□□ 0.71
Hoxa4P06798 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.48■□□□□ 0.71
Hoxa4P06798 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxa4P06798 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
Hoxa4P06798 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxa4P06798 Gm11421-201ENSMUST00000122124 294 ntBASIC19.48■□□□□ 0.71
Hoxa4P06798 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.48■□□□□ 0.71
Hoxa4P06798 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxa4P06798 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxa4P06798 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxa4P06798 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxa4P06798 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.47■□□□□ 0.71
Hoxa4P06798 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Hoxa4P06798 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Hoxa4P06798 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.47■□□□□ 0.71
Hoxa4P06798 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Hoxa4P06798 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxa4P06798 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxa4P06798 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxa4P06798 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Hoxa4P06798 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxa4P06798 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxa4P06798 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxa4P06798 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Hoxa4P06798 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxa4P06798 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxa4P06798 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.47■□□□□ 0.71
Hoxa4P06798 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa4P06798 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Hoxa4P06798 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa4P06798 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa4P06798 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa4P06798 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa4P06798 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa4P06798 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa4P06798 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.46■□□□□ 0.71
Hoxa4P06798 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa4P06798 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Hoxa4P06798 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa4P06798 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa4P06798 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa4P06798 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa4P06798 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa4P06798 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa4P06798 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa4P06798 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa4P06798 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa4P06798 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa4P06798 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa4P06798 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa4P06798 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa4P06798 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.45■□□□□ 0.7
Hoxa4P06798 Gm43060-201ENSMUST00000200621 289 ntBASIC19.45■□□□□ 0.7
Hoxa4P06798 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa4P06798 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa4P06798 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa4P06798 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxa4P06798 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Hoxa4P06798 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxa4P06798 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxa4P06798 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.44■□□□□ 0.7
Hoxa4P06798 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxa4P06798 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxa4P06798 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxa4P06798 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxa4P06798 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hoxa4P06798 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.43■□□□□ 0.7
Hoxa4P06798 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
Hoxa4P06798 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.43■□□□□ 0.7
Hoxa4P06798 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxa4P06798 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Hoxa4P06798 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hoxa4P06798 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxa4P06798 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxa4P06798 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxa4P06798 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxa4P06798 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Hoxa4P06798 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms