Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Matn4O89029 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Matn4O89029 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Matn4O89029 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Matn4O89029 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Matn4O89029 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Matn4O89029 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Matn4O89029 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Matn4O89029 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Matn4O89029 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Matn4O89029 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Matn4O89029 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Matn4O89029 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Matn4O89029 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.64■□□□□ 0.57
Matn4O89029 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Matn4O89029 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.64■□□□□ 0.57
Matn4O89029 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Matn4O89029 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Matn4O89029 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.63■□□□□ 0.57
Matn4O89029 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Matn4O89029 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Matn4O89029 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.63■□□□□ 0.57
Matn4O89029 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Matn4O89029 Gm9870-201ENSMUST00000063874 645 ntBASIC18.63■□□□□ 0.57
Matn4O89029 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Matn4O89029 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Matn4O89029 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Matn4O89029 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Matn4O89029 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Matn4O89029 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Matn4O89029 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Matn4O89029 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Matn4O89029 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Matn4O89029 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Matn4O89029 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Matn4O89029 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Matn4O89029 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Matn4O89029 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Matn4O89029 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Matn4O89029 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Matn4O89029 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Matn4O89029 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.61■□□□□ 0.57
Matn4O89029 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Matn4O89029 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Matn4O89029 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Matn4O89029 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Matn4O89029 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Matn4O89029 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Matn4O89029 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Matn4O89029 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Matn4O89029 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
Matn4O89029 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Matn4O89029 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.6■□□□□ 0.57
Matn4O89029 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Matn4O89029 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Matn4O89029 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Matn4O89029 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Matn4O89029 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Matn4O89029 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Matn4O89029 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Matn4O89029 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Matn4O89029 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Matn4O89029 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Matn4O89029 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Matn4O89029 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.59■□□□□ 0.57
Matn4O89029 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Matn4O89029 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Matn4O89029 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.59■□□□□ 0.57
Matn4O89029 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Matn4O89029 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Matn4O89029 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.59■□□□□ 0.57
Matn4O89029 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Matn4O89029 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Matn4O89029 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Matn4O89029 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Matn4O89029 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Matn4O89029 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Matn4O89029 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Matn4O89029 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Matn4O89029 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.58■□□□□ 0.57
Matn4O89029 Golph3-205ENSMUST00000228671 2842 ntBASIC18.58■□□□□ 0.57
Matn4O89029 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Matn4O89029 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.58■□□□□ 0.56
Matn4O89029 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Matn4O89029 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.58■□□□□ 0.56
Matn4O89029 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.58■□□□□ 0.56
Matn4O89029 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.58■□□□□ 0.56
Matn4O89029 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.58■□□□□ 0.56
Matn4O89029 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Matn4O89029 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Matn4O89029 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Matn4O89029 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Matn4O89029 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Matn4O89029 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
Matn4O89029 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Matn4O89029 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Matn4O89029 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.57■□□□□ 0.56
Matn4O89029 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.57■□□□□ 0.56
Matn4O89029 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Matn4O89029 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms