Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hcn1O88704 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Hcn1O88704 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.8■□□□□ 0.6
Hcn1O88704 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.8■□□□□ 0.6
Hcn1O88704 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hcn1O88704 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Hcn1O88704 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.8■□□□□ 0.6
Hcn1O88704 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.8■□□□□ 0.6
Hcn1O88704 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn1O88704 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn1O88704 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.79■□□□□ 0.6
Hcn1O88704 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.79■□□□□ 0.6
Hcn1O88704 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn1O88704 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn1O88704 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn1O88704 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn1O88704 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn1O88704 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn1O88704 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.79■□□□□ 0.6
Hcn1O88704 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcn1O88704 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hcn1O88704 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.78■□□□□ 0.6
Hcn1O88704 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hcn1O88704 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.78■□□□□ 0.6
Hcn1O88704 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hcn1O88704 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hcn1O88704 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Hcn1O88704 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hcn1O88704 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hcn1O88704 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hcn1O88704 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.77■□□□□ 0.6
Hcn1O88704 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hcn1O88704 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hcn1O88704 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Hcn1O88704 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hcn1O88704 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Hcn1O88704 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hcn1O88704 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Hcn1O88704 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hcn1O88704 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Hcn1O88704 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.76■□□□□ 0.59
Hcn1O88704 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hcn1O88704 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hcn1O88704 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hcn1O88704 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Hcn1O88704 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Hcn1O88704 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.76■□□□□ 0.59
Hcn1O88704 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Hcn1O88704 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hcn1O88704 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Hcn1O88704 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hcn1O88704 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hcn1O88704 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hcn1O88704 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hcn1O88704 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.75■□□□□ 0.59
Hcn1O88704 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.75■□□□□ 0.59
Hcn1O88704 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hcn1O88704 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hcn1O88704 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.75■□□□□ 0.59
Hcn1O88704 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hcn1O88704 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hcn1O88704 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hcn1O88704 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.75■□□□□ 0.59
Hcn1O88704 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.74■□□□□ 0.59
Hcn1O88704 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hcn1O88704 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hcn1O88704 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hcn1O88704 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hcn1O88704 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hcn1O88704 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hcn1O88704 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hcn1O88704 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.74■□□□□ 0.59
Hcn1O88704 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hcn1O88704 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hcn1O88704 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hcn1O88704 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hcn1O88704 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hcn1O88704 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.73■□□□□ 0.59
Hcn1O88704 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Hcn1O88704 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hcn1O88704 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Hcn1O88704 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hcn1O88704 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hcn1O88704 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.73■□□□□ 0.59
Hcn1O88704 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hcn1O88704 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hcn1O88704 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hcn1O88704 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hcn1O88704 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hcn1O88704 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hcn1O88704 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hcn1O88704 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hcn1O88704 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hcn1O88704 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hcn1O88704 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hcn1O88704 Gm43530-201ENSMUST00000195920 274 ntBASIC18.72■□□□□ 0.59
Hcn1O88704 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hcn1O88704 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hcn1O88704 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.72■□□□□ 0.59
Hcn1O88704 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms