Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Becn1O88597 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
Becn1O88597 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Becn1O88597 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Becn1O88597 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.43■■□□□ 1.18
Becn1O88597 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Becn1O88597 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.43■■□□□ 1.18
Becn1O88597 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Becn1O88597 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Becn1O88597 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Becn1O88597 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Becn1O88597 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Becn1O88597 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Becn1O88597 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Becn1O88597 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
Becn1O88597 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Becn1O88597 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Becn1O88597 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Becn1O88597 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Becn1O88597 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Becn1O88597 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Becn1O88597 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Becn1O88597 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Becn1O88597 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Becn1O88597 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Becn1O88597 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Becn1O88597 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC22.41■■□□□ 1.18
Becn1O88597 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Becn1O88597 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Becn1O88597 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Becn1O88597 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.41■■□□□ 1.18
Becn1O88597 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Becn1O88597 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Becn1O88597 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Becn1O88597 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Becn1O88597 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Becn1O88597 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.4■■□□□ 1.18
Becn1O88597 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Becn1O88597 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Becn1O88597 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Becn1O88597 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Becn1O88597 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Becn1O88597 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Becn1O88597 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Becn1O88597 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Becn1O88597 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.39■■□□□ 1.17
Becn1O88597 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Becn1O88597 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Becn1O88597 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.17
Becn1O88597 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Becn1O88597 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Becn1O88597 Rarb-207ENSMUST00000225921 2756 ntBASIC22.38■■□□□ 1.17
Becn1O88597 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Becn1O88597 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Becn1O88597 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC22.38■■□□□ 1.17
Becn1O88597 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Becn1O88597 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.38■■□□□ 1.17
Becn1O88597 Gm45444-201ENSMUST00000211394 898 ntBASIC22.38■■□□□ 1.17
Becn1O88597 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Becn1O88597 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
Becn1O88597 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Becn1O88597 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Becn1O88597 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.38■■□□□ 1.17
Becn1O88597 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Becn1O88597 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Becn1O88597 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Becn1O88597 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Becn1O88597 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Becn1O88597 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Becn1O88597 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Becn1O88597 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Becn1O88597 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Becn1O88597 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC22.37■■□□□ 1.17
Becn1O88597 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Becn1O88597 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Becn1O88597 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC22.36■■□□□ 1.17
Becn1O88597 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Becn1O88597 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Becn1O88597 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Becn1O88597 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Becn1O88597 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Becn1O88597 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
Becn1O88597 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Becn1O88597 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Becn1O88597 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Becn1O88597 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Becn1O88597 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Becn1O88597 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Becn1O88597 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC22.36■■□□□ 1.17
Becn1O88597 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Becn1O88597 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Becn1O88597 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Becn1O88597 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Becn1O88597 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Becn1O88597 Fam105a-203ENSMUST00000226170 3043 ntBASIC22.35■■□□□ 1.17
Becn1O88597 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Becn1O88597 Gm13238-201ENSMUST00000117655 780 ntBASIC22.35■■□□□ 1.17
Becn1O88597 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.35■■□□□ 1.17
Becn1O88597 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Becn1O88597 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms