Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cops4O88544 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.15■□□□□ 0.5
Cops4O88544 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.15■□□□□ 0.5
Cops4O88544 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cops4O88544 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cops4O88544 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cops4O88544 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cops4O88544 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cops4O88544 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.15■□□□□ 0.5
Cops4O88544 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
Cops4O88544 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Cops4O88544 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cops4O88544 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cops4O88544 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Cops4O88544 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cops4O88544 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.14■□□□□ 0.49
Cops4O88544 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.14■□□□□ 0.49
Cops4O88544 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cops4O88544 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cops4O88544 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cops4O88544 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops4O88544 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.13■□□□□ 0.49
Cops4O88544 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cops4O88544 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops4O88544 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops4O88544 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops4O88544 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cops4O88544 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops4O88544 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cops4O88544 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops4O88544 Gm5921-201ENSMUST00000075898 882 ntBASIC18.13■□□□□ 0.49
Cops4O88544 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops4O88544 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops4O88544 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops4O88544 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cops4O88544 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cops4O88544 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops4O88544 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops4O88544 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops4O88544 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops4O88544 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops4O88544 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops4O88544 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops4O88544 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Cops4O88544 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops4O88544 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cops4O88544 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cops4O88544 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cops4O88544 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cops4O88544 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Cops4O88544 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cops4O88544 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Cops4O88544 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Cops4O88544 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cops4O88544 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cops4O88544 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cops4O88544 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cops4O88544 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cops4O88544 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cops4O88544 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.1■□□□□ 0.49
Cops4O88544 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops4O88544 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops4O88544 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops4O88544 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cops4O88544 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.1■□□□□ 0.49
Cops4O88544 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops4O88544 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cops4O88544 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops4O88544 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cops4O88544 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Cops4O88544 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cops4O88544 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cops4O88544 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cops4O88544 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Cops4O88544 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.09■□□□□ 0.49
Cops4O88544 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.09■□□□□ 0.49
Cops4O88544 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cops4O88544 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cops4O88544 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cops4O88544 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cops4O88544 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.08■□□□□ 0.49
Cops4O88544 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cops4O88544 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cops4O88544 Gm43566-201ENSMUST00000196851 808 ntBASIC18.08■□□□□ 0.48
Cops4O88544 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cops4O88544 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cops4O88544 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cops4O88544 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cops4O88544 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cops4O88544 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.07■□□□□ 0.48
Cops4O88544 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cops4O88544 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cops4O88544 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cops4O88544 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cops4O88544 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cops4O88544 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cops4O88544 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cops4O88544 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.06■□□□□ 0.48
Cops4O88544 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cops4O88544 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms