Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vti1bO88384 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.73■□□□□ 0.59
Vti1bO88384 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vti1bO88384 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vti1bO88384 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vti1bO88384 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vti1bO88384 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.73■□□□□ 0.59
Vti1bO88384 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.73■□□□□ 0.59
Vti1bO88384 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vti1bO88384 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Vti1bO88384 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vti1bO88384 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Vti1bO88384 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vti1bO88384 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vti1bO88384 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vti1bO88384 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vti1bO88384 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
Vti1bO88384 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Vti1bO88384 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vti1bO88384 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vti1bO88384 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vti1bO88384 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vti1bO88384 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vti1bO88384 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Vti1bO88384 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vti1bO88384 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vti1bO88384 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Vti1bO88384 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Vti1bO88384 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vti1bO88384 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vti1bO88384 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vti1bO88384 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vti1bO88384 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Vti1bO88384 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Vti1bO88384 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vti1bO88384 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Vti1bO88384 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vti1bO88384 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vti1bO88384 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.7■□□□□ 0.58
Vti1bO88384 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Vti1bO88384 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vti1bO88384 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.7■□□□□ 0.58
Vti1bO88384 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Vti1bO88384 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vti1bO88384 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Vti1bO88384 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Vti1bO88384 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vti1bO88384 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vti1bO88384 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vti1bO88384 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.69■□□□□ 0.58
Vti1bO88384 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vti1bO88384 Gm7143-201ENSMUST00000222811 859 ntBASIC18.69■□□□□ 0.58
Vti1bO88384 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vti1bO88384 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.69■□□□□ 0.58
Vti1bO88384 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vti1bO88384 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vti1bO88384 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.68■□□□□ 0.58
Vti1bO88384 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vti1bO88384 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vti1bO88384 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.68■□□□□ 0.58
Vti1bO88384 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.68■□□□□ 0.58
Vti1bO88384 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.68■□□□□ 0.58
Vti1bO88384 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.68■□□□□ 0.58
Vti1bO88384 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vti1bO88384 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.68■□□□□ 0.58
Vti1bO88384 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vti1bO88384 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vti1bO88384 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vti1bO88384 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vti1bO88384 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vti1bO88384 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vti1bO88384 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vti1bO88384 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Vti1bO88384 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vti1bO88384 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vti1bO88384 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Vti1bO88384 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vti1bO88384 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vti1bO88384 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vti1bO88384 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vti1bO88384 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vti1bO88384 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vti1bO88384 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vti1bO88384 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vti1bO88384 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vti1bO88384 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.66■□□□□ 0.58
Vti1bO88384 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
Vti1bO88384 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vti1bO88384 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Vti1bO88384 Gm9870-201ENSMUST00000063874 645 ntBASIC18.66■□□□□ 0.58
Vti1bO88384 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vti1bO88384 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vti1bO88384 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vti1bO88384 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vti1bO88384 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.65■□□□□ 0.58
Vti1bO88384 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vti1bO88384 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Vti1bO88384 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vti1bO88384 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vti1bO88384 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms