Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm10139O88245 Gm5522-201ENSMUST00000189483 1242 ntBASIC12.04□□□□□ -0.48
Gm10139O88245 Gm7417-201ENSMUST00000192950 473 ntBASIC12.04□□□□□ -0.48
Gm10139O88245 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm10139O88245 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm10139O88245 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC12.04□□□□□ -0.48
Gm10139O88245 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm10139O88245 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm10139O88245 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10139O88245 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10139O88245 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Gm10139O88245 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10139O88245 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10139O88245 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC12.03□□□□□ -0.48
Gm10139O88245 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10139O88245 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Gm10139O88245 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10139O88245 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10139O88245 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10139O88245 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Gm10139O88245 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Gm10139O88245 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10139O88245 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10139O88245 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Gm10139O88245 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Gm10139O88245 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Gm10139O88245 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm10139O88245 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm10139O88245 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Gm10139O88245 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10139O88245 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Gm10139O88245 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10139O88245 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10139O88245 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10139O88245 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10139O88245 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10139O88245 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10139O88245 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10139O88245 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10139O88245 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10139O88245 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10139O88245 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10139O88245 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10139O88245 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10139O88245 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10139O88245 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10139O88245 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10139O88245 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC12.01□□□□□ -0.49
Gm10139O88245 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
Gm10139O88245 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10139O88245 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10139O88245 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC12.01□□□□□ -0.49
Gm10139O88245 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10139O88245 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Gm10139O88245 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10139O88245 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10139O88245 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10139O88245 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC12.01□□□□□ -0.49
Gm10139O88245 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10139O88245 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10139O88245 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10139O88245 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10139O88245 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10139O88245 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10139O88245 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10139O88245 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10139O88245 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10139O88245 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10139O88245 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gm10139O88245 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10139O88245 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10139O88245 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gm10139O88245 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10139O88245 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10139O88245 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10139O88245 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10139O88245 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10139O88245 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10139O88245 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10139O88245 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10139O88245 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10139O88245 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10139O88245 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm10139O88245 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10139O88245 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10139O88245 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10139O88245 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10139O88245 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10139O88245 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10139O88245 Krt8-ps-201ENSMUST00000208495 945 ntBASIC11.99□□□□□ -0.49
Gm10139O88245 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Gm10139O88245 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10139O88245 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10139O88245 Gm5812-201ENSMUST00000061073 957 ntBASIC11.99□□□□□ -0.49
Gm10139O88245 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10139O88245 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Gm10139O88245 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10139O88245 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Gm10139O88245 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm10139O88245 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms