Protein–RNA interactions for Protein: O55229

Chkb, Choline/ethanolamine kinase, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkbO55229 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ChkbO55229 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ChkbO55229 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ChkbO55229 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ChkbO55229 Gm40881-201ENSMUST00000223397 166 ntBASIC20.92■□□□□ 0.94
ChkbO55229 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.92■□□□□ 0.94
ChkbO55229 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ChkbO55229 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ChkbO55229 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
ChkbO55229 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ChkbO55229 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.92■□□□□ 0.94
ChkbO55229 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ChkbO55229 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ChkbO55229 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ChkbO55229 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ChkbO55229 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.91■□□□□ 0.94
ChkbO55229 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ChkbO55229 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.91■□□□□ 0.94
ChkbO55229 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ChkbO55229 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ChkbO55229 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
ChkbO55229 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ChkbO55229 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
ChkbO55229 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ChkbO55229 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
ChkbO55229 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ChkbO55229 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.89■□□□□ 0.94
ChkbO55229 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ChkbO55229 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ChkbO55229 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ChkbO55229 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ChkbO55229 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ChkbO55229 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.88■□□□□ 0.93
ChkbO55229 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ChkbO55229 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
ChkbO55229 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
ChkbO55229 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.88■□□□□ 0.93
ChkbO55229 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ChkbO55229 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
ChkbO55229 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
ChkbO55229 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.88■□□□□ 0.93
ChkbO55229 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ChkbO55229 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
ChkbO55229 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ChkbO55229 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ChkbO55229 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.87■□□□□ 0.93
ChkbO55229 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ChkbO55229 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ChkbO55229 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ChkbO55229 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ChkbO55229 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
ChkbO55229 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ChkbO55229 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.86■□□□□ 0.93
ChkbO55229 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ChkbO55229 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.86■□□□□ 0.93
ChkbO55229 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.86■□□□□ 0.93
ChkbO55229 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ChkbO55229 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ChkbO55229 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ChkbO55229 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ChkbO55229 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ChkbO55229 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.85■□□□□ 0.93
ChkbO55229 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.85■□□□□ 0.93
ChkbO55229 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.85■□□□□ 0.93
ChkbO55229 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.85■□□□□ 0.93
ChkbO55229 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ChkbO55229 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ChkbO55229 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ChkbO55229 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ChkbO55229 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ChkbO55229 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.85■□□□□ 0.93
ChkbO55229 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ChkbO55229 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ChkbO55229 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
ChkbO55229 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ChkbO55229 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ChkbO55229 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ChkbO55229 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.84■□□□□ 0.93
ChkbO55229 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.84■□□□□ 0.93
ChkbO55229 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.84■□□□□ 0.93
ChkbO55229 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ChkbO55229 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ChkbO55229 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ChkbO55229 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ChkbO55229 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ChkbO55229 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ChkbO55229 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
ChkbO55229 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.83■□□□□ 0.93
ChkbO55229 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ChkbO55229 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ChkbO55229 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ChkbO55229 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ChkbO55229 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ChkbO55229 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ChkbO55229 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.82■□□□□ 0.92
ChkbO55229 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
ChkbO55229 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ChkbO55229 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ChkbO55229 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ChkbO55229 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms