Protein–RNA interactions for Protein: O35892

Sp100, Nuclear autoantigen Sp-100, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp100O35892 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sp100O35892 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sp100O35892 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sp100O35892 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sp100O35892 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sp100O35892 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sp100O35892 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Sp100O35892 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sp100O35892 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sp100O35892 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sp100O35892 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sp100O35892 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sp100O35892 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sp100O35892 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sp100O35892 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.18■□□□□ 0.34
Sp100O35892 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Sp100O35892 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sp100O35892 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sp100O35892 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sp100O35892 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sp100O35892 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sp100O35892 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.17■□□□□ 0.34
Sp100O35892 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sp100O35892 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.17■□□□□ 0.34
Sp100O35892 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Sp100O35892 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.17■□□□□ 0.34
Sp100O35892 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sp100O35892 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.17■□□□□ 0.34
Sp100O35892 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sp100O35892 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sp100O35892 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sp100O35892 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sp100O35892 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.16■□□□□ 0.34
Sp100O35892 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sp100O35892 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sp100O35892 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.16■□□□□ 0.34
Sp100O35892 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sp100O35892 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sp100O35892 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sp100O35892 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sp100O35892 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Sp100O35892 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sp100O35892 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.15■□□□□ 0.34
Sp100O35892 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sp100O35892 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sp100O35892 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.15■□□□□ 0.34
Sp100O35892 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.15■□□□□ 0.34
Sp100O35892 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.15■□□□□ 0.34
Sp100O35892 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sp100O35892 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sp100O35892 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sp100O35892 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Sp100O35892 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.15■□□□□ 0.34
Sp100O35892 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sp100O35892 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sp100O35892 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Sp100O35892 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sp100O35892 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sp100O35892 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.14■□□□□ 0.33
Sp100O35892 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sp100O35892 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sp100O35892 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Sp100O35892 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sp100O35892 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sp100O35892 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Sp100O35892 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp100O35892 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp100O35892 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Sp100O35892 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Sp100O35892 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp100O35892 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp100O35892 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sp100O35892 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.13■□□□□ 0.33
Sp100O35892 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp100O35892 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sp100O35892 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sp100O35892 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Sp100O35892 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp100O35892 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sp100O35892 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp100O35892 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp100O35892 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sp100O35892 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp100O35892 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp100O35892 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp100O35892 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sp100O35892 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.12■□□□□ 0.33
Sp100O35892 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.12■□□□□ 0.33
Sp100O35892 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sp100O35892 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sp100O35892 Gm15546-201ENSMUST00000122095 826 ntBASIC17.12■□□□□ 0.33
Sp100O35892 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sp100O35892 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp100O35892 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sp100O35892 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sp100O35892 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp100O35892 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp100O35892 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp100O35892 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sp100O35892 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms