Protein–RNA interactions for Protein: O35646

Capn6, Calpain-6, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn6O35646 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Capn6O35646 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Capn6O35646 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Capn6O35646 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Capn6O35646 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Capn6O35646 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Capn6O35646 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.1■□□□□ 0.81
Capn6O35646 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Capn6O35646 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Capn6O35646 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Capn6O35646 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Capn6O35646 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Capn6O35646 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Capn6O35646 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Capn6O35646 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Capn6O35646 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Capn6O35646 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Capn6O35646 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Capn6O35646 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
Capn6O35646 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.09■□□□□ 0.81
Capn6O35646 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Capn6O35646 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Capn6O35646 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Capn6O35646 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Capn6O35646 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Capn6O35646 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Capn6O35646 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
Capn6O35646 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Capn6O35646 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Capn6O35646 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Capn6O35646 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.07■□□□□ 0.8
Capn6O35646 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Capn6O35646 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Capn6O35646 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Capn6O35646 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Capn6O35646 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Capn6O35646 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Capn6O35646 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.06■□□□□ 0.8
Capn6O35646 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.06■□□□□ 0.8
Capn6O35646 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Capn6O35646 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Capn6O35646 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Capn6O35646 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.06■□□□□ 0.8
Capn6O35646 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.06■□□□□ 0.8
Capn6O35646 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Capn6O35646 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Capn6O35646 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.06■□□□□ 0.8
Capn6O35646 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Capn6O35646 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Capn6O35646 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Capn6O35646 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Capn6O35646 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Capn6O35646 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Capn6O35646 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Capn6O35646 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Capn6O35646 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Capn6O35646 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Capn6O35646 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Capn6O35646 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.04■□□□□ 0.8
Capn6O35646 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Capn6O35646 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Capn6O35646 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.04■□□□□ 0.8
Capn6O35646 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.04■□□□□ 0.8
Capn6O35646 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Capn6O35646 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Capn6O35646 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Capn6O35646 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Capn6O35646 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Capn6O35646 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Capn6O35646 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Capn6O35646 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Capn6O35646 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Capn6O35646 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Capn6O35646 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Capn6O35646 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Capn6O35646 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Capn6O35646 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.03■□□□□ 0.8
Capn6O35646 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Capn6O35646 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Capn6O35646 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Capn6O35646 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Capn6O35646 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Capn6O35646 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Capn6O35646 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Capn6O35646 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Capn6O35646 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Capn6O35646 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Capn6O35646 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Capn6O35646 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Capn6O35646 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Capn6O35646 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
Capn6O35646 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Capn6O35646 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Capn6O35646 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.01■□□□□ 0.79
Capn6O35646 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Capn6O35646 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Capn6O35646 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Capn6O35646 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Capn6O35646 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Capn6O35646 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms