Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Alx4O35137 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx4O35137 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Alx4O35137 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Alx4O35137 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx4O35137 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx4O35137 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Alx4O35137 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Alx4O35137 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx4O35137 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx4O35137 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Alx4O35137 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx4O35137 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx4O35137 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx4O35137 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx4O35137 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx4O35137 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Alx4O35137 Gm43530-201ENSMUST00000195920 274 ntBASIC17.57■□□□□ 0.4
Alx4O35137 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx4O35137 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Alx4O35137 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx4O35137 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Alx4O35137 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Alx4O35137 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx4O35137 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Alx4O35137 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Alx4O35137 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx4O35137 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Alx4O35137 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Alx4O35137 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.56■□□□□ 0.4
Alx4O35137 Gm40881-201ENSMUST00000223397 166 ntBASIC17.56■□□□□ 0.4
Alx4O35137 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Alx4O35137 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Alx4O35137 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.56■□□□□ 0.4
Alx4O35137 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx4O35137 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx4O35137 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx4O35137 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx4O35137 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx4O35137 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.55■□□□□ 0.4
Alx4O35137 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Alx4O35137 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx4O35137 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.55■□□□□ 0.4
Alx4O35137 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx4O35137 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx4O35137 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx4O35137 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Alx4O35137 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx4O35137 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Alx4O35137 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Alx4O35137 Cap2-205ENSMUST00000225824 1634 ntBASIC17.54■□□□□ 0.4
Alx4O35137 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alx4O35137 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.54■□□□□ 0.4
Alx4O35137 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alx4O35137 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Alx4O35137 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Alx4O35137 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alx4O35137 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Alx4O35137 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.54■□□□□ 0.4
Alx4O35137 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alx4O35137 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Alx4O35137 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Alx4O35137 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alx4O35137 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alx4O35137 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Alx4O35137 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alx4O35137 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.53■□□□□ 0.4
Alx4O35137 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Alx4O35137 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Alx4O35137 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Alx4O35137 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Alx4O35137 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Alx4O35137 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Alx4O35137 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.52■□□□□ 0.4
Alx4O35137 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Alx4O35137 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Alx4O35137 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Alx4O35137 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Alx4O35137 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Alx4O35137 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Alx4O35137 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Alx4O35137 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Alx4O35137 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Alx4O35137 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Alx4O35137 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx4O35137 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.51■□□□□ 0.39
Alx4O35137 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx4O35137 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx4O35137 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx4O35137 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx4O35137 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx4O35137 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx4O35137 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.51■□□□□ 0.39
Alx4O35137 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx4O35137 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx4O35137 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx4O35137 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alx4O35137 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Alx4O35137 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Alx4O35137 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms