Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ndufb11O09111 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ndufb11O09111 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ndufb11O09111 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ndufb11O09111 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ndufb11O09111 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ndufb11O09111 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ndufb11O09111 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.85■□□□□ 0.13
Ndufb11O09111 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.85■□□□□ 0.13
Ndufb11O09111 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC15.85■□□□□ 0.13
Ndufb11O09111 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ndufb11O09111 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ndufb11O09111 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ndufb11O09111 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ndufb11O09111 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ndufb11O09111 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ndufb11O09111 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ndufb11O09111 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ndufb11O09111 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ndufb11O09111 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ndufb11O09111 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ndufb11O09111 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ndufb11O09111 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ndufb11O09111 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Ndufb11O09111 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC15.84■□□□□ 0.13
Ndufb11O09111 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.84■□□□□ 0.13
Ndufb11O09111 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ndufb11O09111 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ndufb11O09111 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ndufb11O09111 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ndufb11O09111 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ndufb11O09111 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ndufb11O09111 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ndufb11O09111 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ndufb11O09111 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ndufb11O09111 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ndufb11O09111 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ndufb11O09111 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.83■□□□□ 0.12
Ndufb11O09111 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Ndufb11O09111 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ndufb11O09111 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ndufb11O09111 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ndufb11O09111 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ndufb11O09111 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ndufb11O09111 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ndufb11O09111 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ndufb11O09111 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC15.83■□□□□ 0.12
Ndufb11O09111 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ndufb11O09111 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ndufb11O09111 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.82■□□□□ 0.12
Ndufb11O09111 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ndufb11O09111 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ndufb11O09111 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ndufb11O09111 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ndufb11O09111 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ndufb11O09111 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ndufb11O09111 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ndufb11O09111 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC15.82■□□□□ 0.12
Ndufb11O09111 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ndufb11O09111 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ndufb11O09111 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.82■□□□□ 0.12
Ndufb11O09111 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ndufb11O09111 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ndufb11O09111 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ndufb11O09111 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ndufb11O09111 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.82■□□□□ 0.12
Ndufb11O09111 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ndufb11O09111 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ndufb11O09111 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ndufb11O09111 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ndufb11O09111 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ndufb11O09111 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ndufb11O09111 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ndufb11O09111 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ndufb11O09111 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ndufb11O09111 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
Ndufb11O09111 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ndufb11O09111 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ndufb11O09111 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ndufb11O09111 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ndufb11O09111 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ndufb11O09111 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ndufb11O09111 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ndufb11O09111 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ndufb11O09111 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ndufb11O09111 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ndufb11O09111 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ndufb11O09111 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ndufb11O09111 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ndufb11O09111 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ndufb11O09111 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Ndufb11O09111 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ndufb11O09111 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ndufb11O09111 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.8■□□□□ 0.12
Ndufb11O09111 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.8■□□□□ 0.12
Ndufb11O09111 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.79■□□□□ 0.12
Ndufb11O09111 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ndufb11O09111 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ndufb11O09111 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ndufb11O09111 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms