Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Polr2jO08740 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Polr2jO08740 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.9■□□□□ 0.62
Polr2jO08740 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Polr2jO08740 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Polr2jO08740 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Polr2jO08740 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Polr2jO08740 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.9■□□□□ 0.62
Polr2jO08740 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Polr2jO08740 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Polr2jO08740 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Polr2jO08740 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.9■□□□□ 0.62
Polr2jO08740 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr2jO08740 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Polr2jO08740 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Polr2jO08740 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr2jO08740 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr2jO08740 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr2jO08740 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr2jO08740 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr2jO08740 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Polr2jO08740 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Polr2jO08740 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2jO08740 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2jO08740 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2jO08740 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Polr2jO08740 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Polr2jO08740 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2jO08740 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.88■□□□□ 0.61
Polr2jO08740 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2jO08740 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.88■□□□□ 0.61
Polr2jO08740 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2jO08740 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr2jO08740 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr2jO08740 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr2jO08740 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Polr2jO08740 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr2jO08740 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr2jO08740 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr2jO08740 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr2jO08740 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Polr2jO08740 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr2jO08740 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2jO08740 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.86■□□□□ 0.61
Polr2jO08740 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2jO08740 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2jO08740 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2jO08740 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2jO08740 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2jO08740 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2jO08740 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Polr2jO08740 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2jO08740 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Polr2jO08740 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2jO08740 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2jO08740 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Polr2jO08740 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2jO08740 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2jO08740 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2jO08740 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Polr2jO08740 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2jO08740 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Polr2jO08740 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr2jO08740 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Polr2jO08740 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr2jO08740 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Polr2jO08740 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr2jO08740 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Polr2jO08740 Gm43530-201ENSMUST00000195920 274 ntBASIC18.84■□□□□ 0.61
Polr2jO08740 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr2jO08740 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.84■□□□□ 0.61
Polr2jO08740 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.84■□□□□ 0.61
Polr2jO08740 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr2jO08740 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.83■□□□□ 0.61
Polr2jO08740 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Polr2jO08740 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
Polr2jO08740 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Polr2jO08740 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Polr2jO08740 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Polr2jO08740 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Polr2jO08740 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Polr2jO08740 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Polr2jO08740 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Polr2jO08740 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Polr2jO08740 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.82■□□□□ 0.6
Polr2jO08740 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.82■□□□□ 0.6
Polr2jO08740 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Polr2jO08740 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Polr2jO08740 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Polr2jO08740 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Polr2jO08740 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Polr2jO08740 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Polr2jO08740 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.81■□□□□ 0.6
Polr2jO08740 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Polr2jO08740 Gm9870-201ENSMUST00000063874 645 ntBASIC18.81■□□□□ 0.6
Polr2jO08740 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Polr2jO08740 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Polr2jO08740 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.81■□□□□ 0.6
Polr2jO08740 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr2jO08740 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms