Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slc28a1E9PXX9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc28a1E9PXX9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc28a1E9PXX9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc28a1E9PXX9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc28a1E9PXX9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Slc28a1E9PXX9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Slc28a1E9PXX9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Slc28a1E9PXX9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc28a1E9PXX9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc28a1E9PXX9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc28a1E9PXX9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc28a1E9PXX9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Slc28a1E9PXX9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Slc28a1E9PXX9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc28a1E9PXX9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Slc28a1E9PXX9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc28a1E9PXX9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.55■□□□□ 0.56
Slc28a1E9PXX9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc28a1E9PXX9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc28a1E9PXX9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc28a1E9PXX9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Slc28a1E9PXX9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Slc28a1E9PXX9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc28a1E9PXX9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc28a1E9PXX9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc28a1E9PXX9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Slc28a1E9PXX9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc28a1E9PXX9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.54■□□□□ 0.56
Slc28a1E9PXX9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc28a1E9PXX9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Slc28a1E9PXX9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.54■□□□□ 0.56
Slc28a1E9PXX9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Slc28a1E9PXX9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc28a1E9PXX9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc28a1E9PXX9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slc28a1E9PXX9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc28a1E9PXX9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc28a1E9PXX9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.53■□□□□ 0.56
Slc28a1E9PXX9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.53■□□□□ 0.56
Slc28a1E9PXX9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.53■□□□□ 0.56
Slc28a1E9PXX9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc28a1E9PXX9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc28a1E9PXX9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc28a1E9PXX9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc28a1E9PXX9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Slc28a1E9PXX9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc28a1E9PXX9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc28a1E9PXX9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc28a1E9PXX9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc28a1E9PXX9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Slc28a1E9PXX9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc28a1E9PXX9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Slc28a1E9PXX9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc28a1E9PXX9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.52■□□□□ 0.56
Slc28a1E9PXX9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.52■□□□□ 0.56
Slc28a1E9PXX9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc28a1E9PXX9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc28a1E9PXX9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Slc28a1E9PXX9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc28a1E9PXX9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc28a1E9PXX9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc28a1E9PXX9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc28a1E9PXX9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc28a1E9PXX9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Slc28a1E9PXX9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc28a1E9PXX9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc28a1E9PXX9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc28a1E9PXX9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc28a1E9PXX9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc28a1E9PXX9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc28a1E9PXX9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc28a1E9PXX9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slc28a1E9PXX9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc28a1E9PXX9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slc28a1E9PXX9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc28a1E9PXX9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc28a1E9PXX9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Slc28a1E9PXX9 Gm7143-201ENSMUST00000222811 859 ntBASIC18.5■□□□□ 0.55
Slc28a1E9PXX9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.5■□□□□ 0.55
Slc28a1E9PXX9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slc28a1E9PXX9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc28a1E9PXX9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc28a1E9PXX9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.5■□□□□ 0.55
Slc28a1E9PXX9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.49■□□□□ 0.55
Slc28a1E9PXX9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc28a1E9PXX9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Slc28a1E9PXX9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Slc28a1E9PXX9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Slc28a1E9PXX9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Slc28a1E9PXX9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Slc28a1E9PXX9 Gm10399-202ENSMUST00000202768 748 ntBASIC18.49■□□□□ 0.55
Slc28a1E9PXX9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Slc28a1E9PXX9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc28a1E9PXX9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Slc28a1E9PXX9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc28a1E9PXX9 Cap2-205ENSMUST00000225824 1634 ntBASIC18.49■□□□□ 0.55
Slc28a1E9PXX9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Slc28a1E9PXX9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc28a1E9PXX9 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms