Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdh17E9PXF0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdh17E9PXF0 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.32■□□□□ 0.52
Pcdh17E9PXF0 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.32■□□□□ 0.52
Pcdh17E9PXF0 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.32■□□□□ 0.52
Pcdh17E9PXF0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdh17E9PXF0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh17E9PXF0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh17E9PXF0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh17E9PXF0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh17E9PXF0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh17E9PXF0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.31■□□□□ 0.52
Pcdh17E9PXF0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh17E9PXF0 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.31■□□□□ 0.52
Pcdh17E9PXF0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh17E9PXF0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pcdh17E9PXF0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh17E9PXF0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh17E9PXF0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh17E9PXF0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh17E9PXF0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh17E9PXF0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh17E9PXF0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Pcdh17E9PXF0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh17E9PXF0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh17E9PXF0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh17E9PXF0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh17E9PXF0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh17E9PXF0 Gm26571-201ENSMUST00000181399 666 ntBASIC18.3■□□□□ 0.52
Pcdh17E9PXF0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh17E9PXF0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh17E9PXF0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pcdh17E9PXF0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pcdh17E9PXF0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh17E9PXF0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh17E9PXF0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh17E9PXF0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh17E9PXF0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh17E9PXF0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh17E9PXF0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh17E9PXF0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh17E9PXF0 Gm11421-201ENSMUST00000122124 294 ntBASIC18.29■□□□□ 0.52
Pcdh17E9PXF0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh17E9PXF0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdh17E9PXF0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh17E9PXF0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh17E9PXF0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Pcdh17E9PXF0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh17E9PXF0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh17E9PXF0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdh17E9PXF0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh17E9PXF0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh17E9PXF0 Gm42642-201ENSMUST00000200683 355 ntBASIC18.28■□□□□ 0.52
Pcdh17E9PXF0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh17E9PXF0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh17E9PXF0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh17E9PXF0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdh17E9PXF0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh17E9PXF0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh17E9PXF0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh17E9PXF0 Gm7291-201ENSMUST00000199147 382 ntBASIC18.27■□□□□ 0.52
Pcdh17E9PXF0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.27■□□□□ 0.52
Pcdh17E9PXF0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh17E9PXF0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh17E9PXF0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh17E9PXF0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Pcdh17E9PXF0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdh17E9PXF0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdh17E9PXF0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdh17E9PXF0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh17E9PXF0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh17E9PXF0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh17E9PXF0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh17E9PXF0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdh17E9PXF0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh17E9PXF0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh17E9PXF0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.26■□□□□ 0.51
Pcdh17E9PXF0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh17E9PXF0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh17E9PXF0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdh17E9PXF0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh17E9PXF0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdh17E9PXF0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh17E9PXF0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
Pcdh17E9PXF0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh17E9PXF0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh17E9PXF0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh17E9PXF0 Gm10849-201ENSMUST00000100397 618 ntBASIC18.25■□□□□ 0.51
Pcdh17E9PXF0 Gm42569-201ENSMUST00000200539 472 ntBASIC18.25■□□□□ 0.51
Pcdh17E9PXF0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh17E9PXF0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh17E9PXF0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pcdh17E9PXF0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Pcdh17E9PXF0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh17E9PXF0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh17E9PXF0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Pcdh17E9PXF0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdh17E9PXF0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Pcdh17E9PXF0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh17E9PXF0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms