Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Dchs1E9PVD3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Dchs1E9PVD3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Dchs1E9PVD3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Dchs1E9PVD3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Dchs1E9PVD3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Dchs1E9PVD3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Dchs1E9PVD3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Dchs1E9PVD3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Dchs1E9PVD3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Dchs1E9PVD3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.69■□□□□ 0.42
Dchs1E9PVD3 Mir6982-201ENSMUST00000184354 68 ntBASIC17.69■□□□□ 0.42
Dchs1E9PVD3 Gm8520-201ENSMUST00000186517 868 ntBASIC17.69■□□□□ 0.42
Dchs1E9PVD3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Dchs1E9PVD3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.69■□□□□ 0.42
Dchs1E9PVD3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Dchs1E9PVD3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Dchs1E9PVD3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Dchs1E9PVD3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.69■□□□□ 0.42
Dchs1E9PVD3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Dchs1E9PVD3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dchs1E9PVD3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Dchs1E9PVD3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dchs1E9PVD3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dchs1E9PVD3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dchs1E9PVD3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dchs1E9PVD3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.67■□□□□ 0.42
Dchs1E9PVD3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Dchs1E9PVD3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dchs1E9PVD3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dchs1E9PVD3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dchs1E9PVD3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dchs1E9PVD3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Dchs1E9PVD3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dchs1E9PVD3 Gm7514-201ENSMUST00000209475 934 ntBASIC17.67■□□□□ 0.42
Dchs1E9PVD3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.67■□□□□ 0.42
Dchs1E9PVD3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Dchs1E9PVD3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dchs1E9PVD3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.66■□□□□ 0.42
Dchs1E9PVD3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Dchs1E9PVD3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Dchs1E9PVD3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dchs1E9PVD3 Gm11421-201ENSMUST00000122124 294 ntBASIC17.66■□□□□ 0.42
Dchs1E9PVD3 Gm20049-201ENSMUST00000219950 730 ntBASIC17.66■□□□□ 0.42
Dchs1E9PVD3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dchs1E9PVD3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dchs1E9PVD3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dchs1E9PVD3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dchs1E9PVD3 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.66■□□□□ 0.42
Dchs1E9PVD3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dchs1E9PVD3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dchs1E9PVD3 Gm37856-201ENSMUST00000191634 999 ntBASIC17.65■□□□□ 0.42
Dchs1E9PVD3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.65■□□□□ 0.42
Dchs1E9PVD3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dchs1E9PVD3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.65■□□□□ 0.42
Dchs1E9PVD3 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.65■□□□□ 0.42
Dchs1E9PVD3 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.65■□□□□ 0.42
Dchs1E9PVD3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Dchs1E9PVD3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Dchs1E9PVD3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dchs1E9PVD3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Dchs1E9PVD3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Dchs1E9PVD3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.64■□□□□ 0.42
Dchs1E9PVD3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Dchs1E9PVD3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Dchs1E9PVD3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Dchs1E9PVD3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Dchs1E9PVD3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.64■□□□□ 0.41
Dchs1E9PVD3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Dchs1E9PVD3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Dchs1E9PVD3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Dchs1E9PVD3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Dchs1E9PVD3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.64■□□□□ 0.41
Dchs1E9PVD3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Dchs1E9PVD3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dchs1E9PVD3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Dchs1E9PVD3 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.63■□□□□ 0.41
Dchs1E9PVD3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Dchs1E9PVD3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dchs1E9PVD3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Dchs1E9PVD3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dchs1E9PVD3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dchs1E9PVD3 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.63■□□□□ 0.41
Dchs1E9PVD3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dchs1E9PVD3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dchs1E9PVD3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dchs1E9PVD3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dchs1E9PVD3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Dchs1E9PVD3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dchs1E9PVD3 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.62■□□□□ 0.41
Dchs1E9PVD3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.62■□□□□ 0.41
Dchs1E9PVD3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Dchs1E9PVD3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dchs1E9PVD3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Dchs1E9PVD3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Dchs1E9PVD3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Dchs1E9PVD3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Dchs1E9PVD3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Dchs1E9PVD3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Dchs1E9PVD3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms