Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Hfm1D3Z4R1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Hfm1D3Z4R1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC28.23■■■□□ 2.11
Hfm1D3Z4R1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Hfm1D3Z4R1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Hfm1D3Z4R1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC28.23■■■□□ 2.11
Hfm1D3Z4R1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Hfm1D3Z4R1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Hfm1D3Z4R1 Gm13534-201ENSMUST00000121169 513 ntBASIC28.22■■■□□ 2.11
Hfm1D3Z4R1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC28.22■■■□□ 2.11
Hfm1D3Z4R1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
Hfm1D3Z4R1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Hfm1D3Z4R1 Gm37856-201ENSMUST00000191634 999 ntBASIC28.22■■■□□ 2.11
Hfm1D3Z4R1 AC122769.4-201ENSMUST00000228166 901 ntBASIC28.22■■■□□ 2.11
Hfm1D3Z4R1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Hfm1D3Z4R1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC28.22■■■□□ 2.11
Hfm1D3Z4R1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Hfm1D3Z4R1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Hfm1D3Z4R1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC28.21■■■□□ 2.11
Hfm1D3Z4R1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Hfm1D3Z4R1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC28.2■■■□□ 2.11
Hfm1D3Z4R1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Hfm1D3Z4R1 Gm6420-201ENSMUST00000193885 723 ntBASIC28.2■■■□□ 2.11
Hfm1D3Z4R1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Hfm1D3Z4R1 AC135637.1-201ENSMUST00000227750 365 ntBASIC28.2■■■□□ 2.11
Hfm1D3Z4R1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Hfm1D3Z4R1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC28.2■■■□□ 2.11
Hfm1D3Z4R1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC28.2■■■□□ 2.11
Hfm1D3Z4R1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Hfm1D3Z4R1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Hfm1D3Z4R1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC28.19■■■□□ 2.1
Hfm1D3Z4R1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
Hfm1D3Z4R1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Hfm1D3Z4R1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Hfm1D3Z4R1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Hfm1D3Z4R1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC28.18■■■□□ 2.1
Hfm1D3Z4R1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Hfm1D3Z4R1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Hfm1D3Z4R1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Hfm1D3Z4R1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC28.18■■■□□ 2.1
Hfm1D3Z4R1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Hfm1D3Z4R1 Mir7071-201ENSMUST00000184847 69 ntBASIC28.18■■■□□ 2.1
Hfm1D3Z4R1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Hfm1D3Z4R1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Hfm1D3Z4R1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Hfm1D3Z4R1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
Hfm1D3Z4R1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
Hfm1D3Z4R1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
Hfm1D3Z4R1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
Hfm1D3Z4R1 Gm26524-201ENSMUST00000192339 390 ntBASIC28.17■■■□□ 2.1
Hfm1D3Z4R1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Hfm1D3Z4R1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
Hfm1D3Z4R1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Hfm1D3Z4R1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Hfm1D3Z4R1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Hfm1D3Z4R1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC28.15■■■□□ 2.1
Hfm1D3Z4R1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC28.15■■■□□ 2.1
Hfm1D3Z4R1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
Hfm1D3Z4R1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Hfm1D3Z4R1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC28.14■■■□□ 2.1
Hfm1D3Z4R1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC28.14■■■□□ 2.1
Hfm1D3Z4R1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Hfm1D3Z4R1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Hfm1D3Z4R1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Hfm1D3Z4R1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Hfm1D3Z4R1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Hfm1D3Z4R1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Hfm1D3Z4R1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC28.12■■■□□ 2.09
Hfm1D3Z4R1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Hfm1D3Z4R1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Hfm1D3Z4R1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Hfm1D3Z4R1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Hfm1D3Z4R1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Hfm1D3Z4R1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC28.11■■■□□ 2.09
Hfm1D3Z4R1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC28.11■■■□□ 2.09
Hfm1D3Z4R1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Hfm1D3Z4R1 Gm22325-201ENSMUST00000158904 308 ntBASIC28.11■■■□□ 2.09
Hfm1D3Z4R1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Hfm1D3Z4R1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC28.11■■■□□ 2.09
Hfm1D3Z4R1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Hfm1D3Z4R1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Hfm1D3Z4R1 Gm10812-201ENSMUST00000099864 546 ntBASIC28.1■■■□□ 2.09
Hfm1D3Z4R1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Hfm1D3Z4R1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC28.1■■■□□ 2.09
Hfm1D3Z4R1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC28.1■■■□□ 2.09
Hfm1D3Z4R1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC28.09■■■□□ 2.09
Hfm1D3Z4R1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC28.09■■■□□ 2.09
Hfm1D3Z4R1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC28.09■■■□□ 2.09
Hfm1D3Z4R1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Hfm1D3Z4R1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Hfm1D3Z4R1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC28.09■■■□□ 2.09
Hfm1D3Z4R1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Hfm1D3Z4R1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Hfm1D3Z4R1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Hfm1D3Z4R1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.09
Hfm1D3Z4R1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Hfm1D3Z4R1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Hfm1D3Z4R1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC28.08■■■□□ 2.09
Hfm1D3Z4R1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC28.08■■■□□ 2.09
Hfm1D3Z4R1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms