Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx8D3YU81 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Rfx8D3YU81 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx8D3YU81 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx8D3YU81 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rfx8D3YU81 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.89■□□□□ 0.93
Rfx8D3YU81 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.89■□□□□ 0.93
Rfx8D3YU81 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rfx8D3YU81 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rfx8D3YU81 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx8D3YU81 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Rfx8D3YU81 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Rfx8D3YU81 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx8D3YU81 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx8D3YU81 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Rfx8D3YU81 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.88■□□□□ 0.93
Rfx8D3YU81 Gm43137-201ENSMUST00000198052 594 ntBASIC20.88■□□□□ 0.93
Rfx8D3YU81 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx8D3YU81 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx8D3YU81 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx8D3YU81 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx8D3YU81 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx8D3YU81 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx8D3YU81 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx8D3YU81 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.87■□□□□ 0.93
Rfx8D3YU81 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx8D3YU81 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Rfx8D3YU81 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx8D3YU81 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx8D3YU81 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx8D3YU81 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Rfx8D3YU81 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx8D3YU81 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.86■□□□□ 0.93
Rfx8D3YU81 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Rfx8D3YU81 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.86■□□□□ 0.93
Rfx8D3YU81 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.86■□□□□ 0.93
Rfx8D3YU81 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx8D3YU81 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Rfx8D3YU81 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx8D3YU81 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx8D3YU81 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx8D3YU81 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx8D3YU81 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Rfx8D3YU81 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx8D3YU81 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.85■□□□□ 0.93
Rfx8D3YU81 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx8D3YU81 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx8D3YU81 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Rfx8D3YU81 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Rfx8D3YU81 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx8D3YU81 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx8D3YU81 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.85■□□□□ 0.93
Rfx8D3YU81 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx8D3YU81 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Rfx8D3YU81 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx8D3YU81 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx8D3YU81 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx8D3YU81 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx8D3YU81 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.84■□□□□ 0.93
Rfx8D3YU81 Gm27454-201ENSMUST00000185090 204 ntBASIC20.84■□□□□ 0.93
Rfx8D3YU81 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Rfx8D3YU81 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx8D3YU81 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfx8D3YU81 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.83■□□□□ 0.93
Rfx8D3YU81 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rfx8D3YU81 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx8D3YU81 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.82■□□□□ 0.92
Rfx8D3YU81 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx8D3YU81 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx8D3YU81 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.82■□□□□ 0.92
Rfx8D3YU81 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rfx8D3YU81 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx8D3YU81 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx8D3YU81 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rfx8D3YU81 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx8D3YU81 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx8D3YU81 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.82■□□□□ 0.92
Rfx8D3YU81 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx8D3YU81 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx8D3YU81 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx8D3YU81 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.81■□□□□ 0.92
Rfx8D3YU81 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx8D3YU81 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.81■□□□□ 0.92
Rfx8D3YU81 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Rfx8D3YU81 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx8D3YU81 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx8D3YU81 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx8D3YU81 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx8D3YU81 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx8D3YU81 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Rfx8D3YU81 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx8D3YU81 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx8D3YU81 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx8D3YU81 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx8D3YU81 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx8D3YU81 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx8D3YU81 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx8D3YU81 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx8D3YU81 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx8D3YU81 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms