Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Gm12887B1AVM1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
Gm12887B1AVM1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Gm12887B1AVM1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Gm12887B1AVM1 Gm14523-201ENSMUST00000117260 558 ntBASIC15.93■□□□□ 0.14
Gm12887B1AVM1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Gm12887B1AVM1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Gm12887B1AVM1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Gm12887B1AVM1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm12887B1AVM1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm12887B1AVM1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm12887B1AVM1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm12887B1AVM1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm12887B1AVM1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm12887B1AVM1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm12887B1AVM1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm12887B1AVM1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Gm12887B1AVM1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.93■□□□□ 0.14
Gm12887B1AVM1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Gm12887B1AVM1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Gm12887B1AVM1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Gm12887B1AVM1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Gm12887B1AVM1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Gm12887B1AVM1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Gm12887B1AVM1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Gm12887B1AVM1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
Gm12887B1AVM1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Gm12887B1AVM1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Gm12887B1AVM1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Gm12887B1AVM1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Gm12887B1AVM1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm12887B1AVM1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Gm12887B1AVM1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Gm12887B1AVM1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.91■□□□□ 0.14
Gm12887B1AVM1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm12887B1AVM1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Gm12887B1AVM1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Gm12887B1AVM1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Gm12887B1AVM1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm12887B1AVM1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm12887B1AVM1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm12887B1AVM1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm12887B1AVM1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC15.91■□□□□ 0.14
Gm12887B1AVM1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm12887B1AVM1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
Gm12887B1AVM1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm12887B1AVM1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm12887B1AVM1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm12887B1AVM1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Gm12887B1AVM1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Gm12887B1AVM1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm12887B1AVM1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm12887B1AVM1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm12887B1AVM1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Gm12887B1AVM1 Gm7332-201ENSMUST00000118351 454 ntBASIC15.9■□□□□ 0.14
Gm12887B1AVM1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm12887B1AVM1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm12887B1AVM1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm12887B1AVM1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm12887B1AVM1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gm12887B1AVM1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gm12887B1AVM1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm12887B1AVM1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.89■□□□□ 0.13
Gm12887B1AVM1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm12887B1AVM1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm12887B1AVM1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm12887B1AVM1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Gm12887B1AVM1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm12887B1AVM1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.88■□□□□ 0.13
Gm12887B1AVM1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.88■□□□□ 0.13
Gm12887B1AVM1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm12887B1AVM1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm12887B1AVM1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm12887B1AVM1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm12887B1AVM1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm12887B1AVM1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms