Protein–RNA interactions for Protein: B1ARV6

Pramef20, PRAME family member 20, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pramef20B1ARV6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pramef20B1ARV6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pramef20B1ARV6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Pramef20B1ARV6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pramef20B1ARV6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pramef20B1ARV6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.37■□□□□ 0.69
Pramef20B1ARV6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pramef20B1ARV6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pramef20B1ARV6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.36■□□□□ 0.69
Pramef20B1ARV6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pramef20B1ARV6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.36■□□□□ 0.69
Pramef20B1ARV6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pramef20B1ARV6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pramef20B1ARV6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pramef20B1ARV6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pramef20B1ARV6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pramef20B1ARV6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pramef20B1ARV6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pramef20B1ARV6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pramef20B1ARV6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pramef20B1ARV6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.35■□□□□ 0.69
Pramef20B1ARV6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pramef20B1ARV6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pramef20B1ARV6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pramef20B1ARV6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pramef20B1ARV6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pramef20B1ARV6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pramef20B1ARV6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.35■□□□□ 0.69
Pramef20B1ARV6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pramef20B1ARV6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pramef20B1ARV6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Pramef20B1ARV6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pramef20B1ARV6 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.35■□□□□ 0.69
Pramef20B1ARV6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pramef20B1ARV6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pramef20B1ARV6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pramef20B1ARV6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pramef20B1ARV6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pramef20B1ARV6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pramef20B1ARV6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Pramef20B1ARV6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pramef20B1ARV6 Iqck-206ENSMUST00000208658 2891 ntBASIC19.34■□□□□ 0.69
Pramef20B1ARV6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pramef20B1ARV6 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pramef20B1ARV6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
Pramef20B1ARV6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pramef20B1ARV6 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.34■□□□□ 0.69
Pramef20B1ARV6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pramef20B1ARV6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.34■□□□□ 0.69
Pramef20B1ARV6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pramef20B1ARV6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pramef20B1ARV6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pramef20B1ARV6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Pramef20B1ARV6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pramef20B1ARV6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pramef20B1ARV6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pramef20B1ARV6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Pramef20B1ARV6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pramef20B1ARV6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Pramef20B1ARV6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Pramef20B1ARV6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pramef20B1ARV6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Pramef20B1ARV6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.32■□□□□ 0.68
Pramef20B1ARV6 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.32■□□□□ 0.68
Pramef20B1ARV6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pramef20B1ARV6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pramef20B1ARV6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pramef20B1ARV6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
Pramef20B1ARV6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pramef20B1ARV6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.32■□□□□ 0.68
Pramef20B1ARV6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pramef20B1ARV6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pramef20B1ARV6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pramef20B1ARV6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pramef20B1ARV6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.31■□□□□ 0.68
Pramef20B1ARV6 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pramef20B1ARV6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pramef20B1ARV6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pramef20B1ARV6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pramef20B1ARV6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pramef20B1ARV6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pramef20B1ARV6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pramef20B1ARV6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pramef20B1ARV6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pramef20B1ARV6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pramef20B1ARV6 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.3■□□□□ 0.68
Pramef20B1ARV6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pramef20B1ARV6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pramef20B1ARV6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pramef20B1ARV6 Gm43530-201ENSMUST00000195920 274 ntBASIC19.3■□□□□ 0.68
Pramef20B1ARV6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
Pramef20B1ARV6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pramef20B1ARV6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pramef20B1ARV6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pramef20B1ARV6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pramef20B1ARV6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pramef20B1ARV6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pramef20B1ARV6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pramef20B1ARV6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pramef20B1ARV6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms