Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC13.71□□□□□ -0.21
Trbv13-2A0A140T8N6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trbv13-2A0A140T8N6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv13-2A0A140T8N6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC13.71□□□□□ -0.21
Trbv13-2A0A140T8N6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv13-2A0A140T8N6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv13-2A0A140T8N6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv13-2A0A140T8N6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv13-2A0A140T8N6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv13-2A0A140T8N6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv13-2A0A140T8N6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-2A0A140T8N6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trbv13-2A0A140T8N6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-2A0A140T8N6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-2A0A140T8N6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-2A0A140T8N6 AC140930.3-201ENSMUST00000222935 274 ntBASIC13.7□□□□□ -0.22
Trbv13-2A0A140T8N6 Gm13241-201ENSMUST00000094493 780 ntBASIC13.7□□□□□ -0.22
Trbv13-2A0A140T8N6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-2A0A140T8N6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trbv13-2A0A140T8N6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.7□□□□□ -0.22
Trbv13-2A0A140T8N6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-2A0A140T8N6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Trbv13-2A0A140T8N6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv13-2A0A140T8N6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trbv13-2A0A140T8N6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-2A0A140T8N6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-2A0A140T8N6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-2A0A140T8N6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trbv13-2A0A140T8N6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-2A0A140T8N6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-2A0A140T8N6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-2A0A140T8N6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trbv13-2A0A140T8N6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-2A0A140T8N6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-2A0A140T8N6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-2A0A140T8N6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-2A0A140T8N6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trbv13-2A0A140T8N6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-2A0A140T8N6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-2A0A140T8N6 Iqck-206ENSMUST00000208658 2891 ntBASIC13.68□□□□□ -0.22
Trbv13-2A0A140T8N6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-2A0A140T8N6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC13.68□□□□□ -0.22
Trbv13-2A0A140T8N6 Gm27045-201ENSMUST00000182145 1402 ntBASIC13.68□□□□□ -0.22
Trbv13-2A0A140T8N6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-2A0A140T8N6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-2A0A140T8N6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC13.68□□□□□ -0.22
Trbv13-2A0A140T8N6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-2A0A140T8N6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-2A0A140T8N6 Gm15043-201ENSMUST00000118843 1543 ntBASIC13.68□□□□□ -0.22
Trbv13-2A0A140T8N6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-2A0A140T8N6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-2A0A140T8N6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-2A0A140T8N6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trbv13-2A0A140T8N6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-2A0A140T8N6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-2A0A140T8N6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-2A0A140T8N6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv13-2A0A140T8N6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv13-2A0A140T8N6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC13.67□□□□□ -0.22
Trbv13-2A0A140T8N6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv13-2A0A140T8N6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trbv13-2A0A140T8N6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv13-2A0A140T8N6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv13-2A0A140T8N6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv13-2A0A140T8N6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv13-2A0A140T8N6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv13-2A0A140T8N6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC13.67□□□□□ -0.22
Trbv13-2A0A140T8N6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv13-2A0A140T8N6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC13.67□□□□□ -0.22
Trbv13-2A0A140T8N6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC13.67□□□□□ -0.22
Trbv13-2A0A140T8N6 Gm43034-201ENSMUST00000198678 1364 ntBASIC13.67□□□□□ -0.22
Trbv13-2A0A140T8N6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trbv13-2A0A140T8N6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trbv13-2A0A140T8N6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trbv13-2A0A140T8N6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-2A0A140T8N6 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.66□□□□□ -0.22
Trbv13-2A0A140T8N6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-2A0A140T8N6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-2A0A140T8N6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-2A0A140T8N6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-2A0A140T8N6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-2A0A140T8N6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-2A0A140T8N6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trbv13-2A0A140T8N6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-2A0A140T8N6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv13-2A0A140T8N6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv13-2A0A140T8N6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv13-2A0A140T8N6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv13-2A0A140T8N6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv13-2A0A140T8N6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv13-2A0A140T8N6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv13-2A0A140T8N6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trbv13-2A0A140T8N6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Trbv13-2A0A140T8N6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC13.65□□□□□ -0.22
Trbv13-2A0A140T8N6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trbv13-2A0A140T8N6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC13.65□□□□□ -0.22
Trbv13-2A0A140T8N6 Gm21956-201ENSMUST00000179946 522 ntBASIC13.65□□□□□ -0.22
Trbv13-2A0A140T8N6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC13.65□□□□□ -0.22
Trbv13-2A0A140T8N6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv13-2A0A140T8N6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms