Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.21□□□□□ -0.13
Trav13n-1A0A0G2JEU8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13n-1A0A0G2JEU8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav13n-1A0A0G2JEU8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-1A0A0G2JEU8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-1A0A0G2JEU8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.2□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.19□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.19□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trav13n-1A0A0G2JEU8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.19□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.18□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.18□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-1A0A0G2JEU8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.18□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-1A0A0G2JEU8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav13n-1A0A0G2JEU8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.18□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-1A0A0G2JEU8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.17□□□□□ -0.14
Trav13n-1A0A0G2JEU8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC14.17□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.17□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-1A0A0G2JEU8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13n-1A0A0G2JEU8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms