Protein–RNA interactions for Protein: A0A0G2JES9

Igkv4-54, Immunoglobulin kappa chain variable 4-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-54A0A0G2JES9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv4-54A0A0G2JES9 Gm20634-201ENSMUST00000090779 2956 ntBASIC14.11□□□□□ -0.15
Igkv4-54A0A0G2JES9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv4-54A0A0G2JES9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv4-54A0A0G2JES9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Igkv4-54A0A0G2JES9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Igkv4-54A0A0G2JES9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv4-54A0A0G2JES9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv4-54A0A0G2JES9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv4-54A0A0G2JES9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.1□□□□□ -0.15
Igkv4-54A0A0G2JES9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv4-54A0A0G2JES9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv4-54A0A0G2JES9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv4-54A0A0G2JES9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.1□□□□□ -0.15
Igkv4-54A0A0G2JES9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv4-54A0A0G2JES9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv4-54A0A0G2JES9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv4-54A0A0G2JES9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv4-54A0A0G2JES9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv4-54A0A0G2JES9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Igkv4-54A0A0G2JES9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv4-54A0A0G2JES9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv4-54A0A0G2JES9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv4-54A0A0G2JES9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv4-54A0A0G2JES9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv4-54A0A0G2JES9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv4-54A0A0G2JES9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv4-54A0A0G2JES9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv4-54A0A0G2JES9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv4-54A0A0G2JES9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv4-54A0A0G2JES9 Mir6236-201ENSMUST00000184437 123 ntBASIC14.09□□□□□ -0.15
Igkv4-54A0A0G2JES9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv4-54A0A0G2JES9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv4-54A0A0G2JES9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv4-54A0A0G2JES9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Igkv4-54A0A0G2JES9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Igkv4-54A0A0G2JES9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv4-54A0A0G2JES9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv4-54A0A0G2JES9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv4-54A0A0G2JES9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Igkv4-54A0A0G2JES9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igkv4-54A0A0G2JES9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igkv4-54A0A0G2JES9 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.08□□□□□ -0.16
Igkv4-54A0A0G2JES9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igkv4-54A0A0G2JES9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igkv4-54A0A0G2JES9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igkv4-54A0A0G2JES9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igkv4-54A0A0G2JES9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igkv4-54A0A0G2JES9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igkv4-54A0A0G2JES9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv4-54A0A0G2JES9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv4-54A0A0G2JES9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv4-54A0A0G2JES9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv4-54A0A0G2JES9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv4-54A0A0G2JES9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv4-54A0A0G2JES9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv4-54A0A0G2JES9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv4-54A0A0G2JES9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv4-54A0A0G2JES9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv4-54A0A0G2JES9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.07□□□□□ -0.16
Igkv4-54A0A0G2JES9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv4-54A0A0G2JES9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.07□□□□□ -0.16
Igkv4-54A0A0G2JES9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.07□□□□□ -0.16
Igkv4-54A0A0G2JES9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Igkv4-54A0A0G2JES9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.06□□□□□ -0.16
Igkv4-54A0A0G2JES9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.06□□□□□ -0.16
Igkv4-54A0A0G2JES9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.06□□□□□ -0.16
Igkv4-54A0A0G2JES9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv4-54A0A0G2JES9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv4-54A0A0G2JES9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Igkv4-54A0A0G2JES9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv4-54A0A0G2JES9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv4-54A0A0G2JES9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.06□□□□□ -0.16
Igkv4-54A0A0G2JES9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv4-54A0A0G2JES9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.06□□□□□ -0.16
Igkv4-54A0A0G2JES9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv4-54A0A0G2JES9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Igkv4-54A0A0G2JES9 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.06□□□□□ -0.16
Igkv4-54A0A0G2JES9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv4-54A0A0G2JES9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv4-54A0A0G2JES9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv4-54A0A0G2JES9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv4-54A0A0G2JES9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv4-54A0A0G2JES9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv4-54A0A0G2JES9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Igkv4-54A0A0G2JES9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv4-54A0A0G2JES9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Igkv4-54A0A0G2JES9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Igkv4-54A0A0G2JES9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv4-54A0A0G2JES9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.05□□□□□ -0.16
Igkv4-54A0A0G2JES9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Igkv4-54A0A0G2JES9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
Igkv4-54A0A0G2JES9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv4-54A0A0G2JES9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Igkv4-54A0A0G2JES9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv4-54A0A0G2JES9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv4-54A0A0G2JES9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Igkv4-54A0A0G2JES9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Igkv4-54A0A0G2JES9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv4-54A0A0G2JES9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms