Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trav4-3A0A0B4J1K1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav4-3A0A0B4J1K1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav4-3A0A0B4J1K1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav4-3A0A0B4J1K1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav4-3A0A0B4J1K1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Trav4-3A0A0B4J1K1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav4-3A0A0B4J1K1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav4-3A0A0B4J1K1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav4-3A0A0B4J1K1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav4-3A0A0B4J1K1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav4-3A0A0B4J1K1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4-3A0A0B4J1K1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4-3A0A0B4J1K1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4-3A0A0B4J1K1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4-3A0A0B4J1K1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4-3A0A0B4J1K1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4-3A0A0B4J1K1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4-3A0A0B4J1K1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4-3A0A0B4J1K1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4-3A0A0B4J1K1 Gm8503-201ENSMUST00000118131 455 ntBASIC13.45□□□□□ -0.26
Trav4-3A0A0B4J1K1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4-3A0A0B4J1K1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4-3A0A0B4J1K1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav4-3A0A0B4J1K1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4-3A0A0B4J1K1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav4-3A0A0B4J1K1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Gm11599-201ENSMUST00000118720 878 ntBASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Gm7432-201ENSMUST00000210343 879 ntBASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav4-3A0A0B4J1K1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4-3A0A0B4J1K1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4-3A0A0B4J1K1 Gm6802-201ENSMUST00000167843 1983 ntBASIC13.43□□□□□ -0.26
Trav4-3A0A0B4J1K1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
Trav4-3A0A0B4J1K1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4-3A0A0B4J1K1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4-3A0A0B4J1K1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4-3A0A0B4J1K1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4-3A0A0B4J1K1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav4-3A0A0B4J1K1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4-3A0A0B4J1K1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4-3A0A0B4J1K1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav4-3A0A0B4J1K1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4-3A0A0B4J1K1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4-3A0A0B4J1K1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4-3A0A0B4J1K1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav4-3A0A0B4J1K1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4-3A0A0B4J1K1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4-3A0A0B4J1K1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4-3A0A0B4J1K1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4-3A0A0B4J1K1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4-3A0A0B4J1K1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav4-3A0A0B4J1K1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4-3A0A0B4J1K1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Trav4-3A0A0B4J1K1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC13.42□□□□□ -0.26
Trav4-3A0A0B4J1K1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4-3A0A0B4J1K1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4-3A0A0B4J1K1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav4-3A0A0B4J1K1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav4-3A0A0B4J1K1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4-3A0A0B4J1K1 Gm5540-201ENSMUST00000131852 1848 ntBASIC13.41□□□□□ -0.26
Trav4-3A0A0B4J1K1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4-3A0A0B4J1K1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4-3A0A0B4J1K1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav4-3A0A0B4J1K1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4-3A0A0B4J1K1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4-3A0A0B4J1K1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4-3A0A0B4J1K1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav4-3A0A0B4J1K1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav4-3A0A0B4J1K1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav4-3A0A0B4J1K1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav4-3A0A0B4J1K1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Trav4-3A0A0B4J1K1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Trav4-3A0A0B4J1K1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4-3A0A0B4J1K1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav4-3A0A0B4J1K1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav4-3A0A0B4J1K1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav4-3A0A0B4J1K1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4-3A0A0B4J1K1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trav4-3A0A0B4J1K1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms