Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav11A0A0B4J1J9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav11A0A0B4J1J9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav11A0A0B4J1J9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav11A0A0B4J1J9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav11A0A0B4J1J9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav11A0A0B4J1J9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav11A0A0B4J1J9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav11A0A0B4J1J9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav11A0A0B4J1J9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trav11A0A0B4J1J9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav11A0A0B4J1J9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav11A0A0B4J1J9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav11A0A0B4J1J9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav11A0A0B4J1J9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav11A0A0B4J1J9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav11A0A0B4J1J9 Gm10620-201ENSMUST00000098379 1332 ntBASIC13.5□□□□□ -0.25
Trav11A0A0B4J1J9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav11A0A0B4J1J9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav11A0A0B4J1J9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav11A0A0B4J1J9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav11A0A0B4J1J9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav11A0A0B4J1J9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav11A0A0B4J1J9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav11A0A0B4J1J9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav11A0A0B4J1J9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav11A0A0B4J1J9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav11A0A0B4J1J9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav11A0A0B4J1J9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav11A0A0B4J1J9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav11A0A0B4J1J9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav11A0A0B4J1J9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav11A0A0B4J1J9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav11A0A0B4J1J9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC13.49□□□□□ -0.25
Trav11A0A0B4J1J9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav11A0A0B4J1J9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav11A0A0B4J1J9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav11A0A0B4J1J9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav11A0A0B4J1J9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav11A0A0B4J1J9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav11A0A0B4J1J9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav11A0A0B4J1J9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav11A0A0B4J1J9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav11A0A0B4J1J9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav11A0A0B4J1J9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav11A0A0B4J1J9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Trav11A0A0B4J1J9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav11A0A0B4J1J9 Gm5067-201ENSMUST00000170449 1009 ntBASIC13.48□□□□□ -0.25
Trav11A0A0B4J1J9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav11A0A0B4J1J9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav11A0A0B4J1J9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav11A0A0B4J1J9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav11A0A0B4J1J9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav11A0A0B4J1J9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 Gm43182-201ENSMUST00000199476 2528 ntBASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms