Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv5A0A0B4J1G9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trbv5A0A0B4J1G9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trbv5A0A0B4J1G9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv5A0A0B4J1G9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv5A0A0B4J1G9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Trbv5A0A0B4J1G9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv5A0A0B4J1G9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trbv5A0A0B4J1G9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv5A0A0B4J1G9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv5A0A0B4J1G9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv5A0A0B4J1G9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv5A0A0B4J1G9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv5A0A0B4J1G9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trbv5A0A0B4J1G9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv5A0A0B4J1G9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv5A0A0B4J1G9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trbv5A0A0B4J1G9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC15.82■□□□□ 0.12
Trbv5A0A0B4J1G9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trbv5A0A0B4J1G9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv5A0A0B4J1G9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv5A0A0B4J1G9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.82■□□□□ 0.12
Trbv5A0A0B4J1G9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv5A0A0B4J1G9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv5A0A0B4J1G9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv5A0A0B4J1G9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trbv5A0A0B4J1G9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trbv5A0A0B4J1G9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv5A0A0B4J1G9 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.81■□□□□ 0.12
Trbv5A0A0B4J1G9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv5A0A0B4J1G9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
Trbv5A0A0B4J1G9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv5A0A0B4J1G9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.81■□□□□ 0.12
Trbv5A0A0B4J1G9 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.81■□□□□ 0.12
Trbv5A0A0B4J1G9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.81■□□□□ 0.12
Trbv5A0A0B4J1G9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv5A0A0B4J1G9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv5A0A0B4J1G9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv5A0A0B4J1G9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Trbv5A0A0B4J1G9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv5A0A0B4J1G9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv5A0A0B4J1G9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Trbv5A0A0B4J1G9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv5A0A0B4J1G9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trbv5A0A0B4J1G9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv5A0A0B4J1G9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv5A0A0B4J1G9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv5A0A0B4J1G9 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.79■□□□□ 0.12
Trbv5A0A0B4J1G9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Trbv5A0A0B4J1G9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv5A0A0B4J1G9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.79■□□□□ 0.12
Trbv5A0A0B4J1G9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv5A0A0B4J1G9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv5A0A0B4J1G9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv5A0A0B4J1G9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv5A0A0B4J1G9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv5A0A0B4J1G9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv5A0A0B4J1G9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trbv5A0A0B4J1G9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv5A0A0B4J1G9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Trbv5A0A0B4J1G9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Trbv5A0A0B4J1G9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv5A0A0B4J1G9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv5A0A0B4J1G9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv5A0A0B4J1G9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv5A0A0B4J1G9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv5A0A0B4J1G9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv5A0A0B4J1G9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv5A0A0B4J1G9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trbv5A0A0B4J1G9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv5A0A0B4J1G9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv5A0A0B4J1G9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv5A0A0B4J1G9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.78■□□□□ 0.12
Trbv5A0A0B4J1G9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv5A0A0B4J1G9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv5A0A0B4J1G9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv5A0A0B4J1G9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trbv5A0A0B4J1G9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv5A0A0B4J1G9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv5A0A0B4J1G9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv5A0A0B4J1G9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trbv5A0A0B4J1G9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv5A0A0B4J1G9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trbv5A0A0B4J1G9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv5A0A0B4J1G9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv5A0A0B4J1G9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv5A0A0B4J1G9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv5A0A0B4J1G9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv5A0A0B4J1G9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv5A0A0B4J1G9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Trbv5A0A0B4J1G9 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.77■□□□□ 0.12
Trbv5A0A0B4J1G9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv5A0A0B4J1G9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
Trbv5A0A0B4J1G9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv5A0A0B4J1G9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv5A0A0B4J1G9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.77■□□□□ 0.11
Trbv5A0A0B4J1G9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv5A0A0B4J1G9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv5A0A0B4J1G9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv5A0A0B4J1G9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms