Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv3-4A0A0A6YXF1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.43■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.43■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.43■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv3-4A0A0A6YXF1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv3-4A0A0A6YXF1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.42■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.42■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.42■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv3-4A0A0A6YXF1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.41■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv3-4A0A0A6YXF1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.4■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.4■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv3-4A0A0A6YXF1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ighv3-4A0A0A6YXF1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.39■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv3-4A0A0A6YXF1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.39■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Mir5133-201ENSMUST00000174955 77 ntBASIC16.39■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.39■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv3-4A0A0A6YXF1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.38■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.38■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.38■□□□□ 0.21
Ighv3-4A0A0A6YXF1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.38■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv3-4A0A0A6YXF1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.37■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.37■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.37■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.37■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Gm12441-201ENSMUST00000121806 588 ntBASIC16.36■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.36■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ighv3-4A0A0A6YXF1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv3-4A0A0A6YXF1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms