Protein–RNA interactions for Protein: A0A0A6YWL2

Ighv3-3, Immunoglobulin heavy variable V3-3 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-3A0A0A6YWL2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv3-3A0A0A6YWL2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.45□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv3-3A0A0A6YWL2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ighv3-3A0A0A6YWL2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.44□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.44□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Etf1-202ENSMUST00000180351 108 ntBASIC14.44□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.44□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Gm45102-201ENSMUST00000207427 857 ntBASIC14.44□□□□□ -0.1
Ighv3-3A0A0A6YWL2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.43□□□□□ -0.1
Ighv3-3A0A0A6YWL2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.43□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Gm14117-201ENSMUST00000122417 843 ntBASIC14.43□□□□□ -0.1
Ighv3-3A0A0A6YWL2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.43□□□□□ -0.1
Ighv3-3A0A0A6YWL2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.43□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Gm9959-201ENSMUST00000068277 390 ntBASIC14.43□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv3-3A0A0A6YWL2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.42□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.42□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.42□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.42□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.41□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.41□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.41□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ighv3-3A0A0A6YWL2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-3A0A0A6YWL2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.4□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ighv3-3A0A0A6YWL2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-3A0A0A6YWL2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-3A0A0A6YWL2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-3A0A0A6YWL2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-3A0A0A6YWL2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-3A0A0A6YWL2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-3A0A0A6YWL2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-3A0A0A6YWL2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ighv3-3A0A0A6YWL2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.39□□□□□ -0.11
Ighv3-3A0A0A6YWL2 Gm7417-201ENSMUST00000192950 473 ntBASIC14.39□□□□□ -0.11
Ighv3-3A0A0A6YWL2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 499.8 ms