Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav21-dv12A0A075B6C4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav21-dv12A0A075B6C4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav21-dv12A0A075B6C4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav21-dv12A0A075B6C4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav21-dv12A0A075B6C4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav21-dv12A0A075B6C4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav21-dv12A0A075B6C4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.13■□□□□ 0.01
Trav21-dv12A0A075B6C4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav21-dv12A0A075B6C4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav21-dv12A0A075B6C4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav21-dv12A0A075B6C4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav21-dv12A0A075B6C4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav21-dv12A0A075B6C4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav21-dv12A0A075B6C4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav21-dv12A0A075B6C4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav21-dv12A0A075B6C4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav21-dv12A0A075B6C4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav21-dv12A0A075B6C4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trav21-dv12A0A075B6C4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav21-dv12A0A075B6C4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav21-dv12A0A075B6C4 Mir6236-201ENSMUST00000184437 123 ntBASIC15.12■□□□□ 0.01
Trav21-dv12A0A075B6C4 Gm43530-201ENSMUST00000195920 274 ntBASIC15.12■□□□□ 0.01
Trav21-dv12A0A075B6C4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav21-dv12A0A075B6C4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav21-dv12A0A075B6C4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav21-dv12A0A075B6C4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav21-dv12A0A075B6C4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav21-dv12A0A075B6C4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav21-dv12A0A075B6C4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav21-dv12A0A075B6C4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav21-dv12A0A075B6C4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav21-dv12A0A075B6C4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav21-dv12A0A075B6C4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav21-dv12A0A075B6C4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav21-dv12A0A075B6C4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav21-dv12A0A075B6C4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav21-dv12A0A075B6C4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav21-dv12A0A075B6C4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav21-dv12A0A075B6C4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 Golph3-202ENSMUST00000226517 2359 ntBASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav21-dv12A0A075B6C4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav21-dv12A0A075B6C4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav21-dv12A0A075B6C4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav21-dv12A0A075B6C4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav21-dv12A0A075B6C4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav21-dv12A0A075B6C4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.09■□□□□ 0.01
Trav21-dv12A0A075B6C4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav21-dv12A0A075B6C4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav21-dv12A0A075B6C4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav21-dv12A0A075B6C4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
Trav21-dv12A0A075B6C4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav21-dv12A0A075B6C4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav21-dv12A0A075B6C4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav21-dv12A0A075B6C4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav21-dv12A0A075B6C4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav21-dv12A0A075B6C4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav21-dv12A0A075B6C4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
Trav21-dv12A0A075B6C4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav21-dv12A0A075B6C4 Gm22238-201ENSMUST00000175222 88 ntBASIC15.08■□□□□ 0
Trav21-dv12A0A075B6C4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Trav21-dv12A0A075B6C4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms