Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-5A0A075B6B9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-5A0A075B6B9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-5A0A075B6B9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav6d-5A0A075B6B9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-5A0A075B6B9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-5A0A075B6B9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-5A0A075B6B9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-5A0A075B6B9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-5A0A075B6B9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-5A0A075B6B9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-5A0A075B6B9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-5A0A075B6B9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-5A0A075B6B9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-5A0A075B6B9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-5A0A075B6B9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-5A0A075B6B9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-5A0A075B6B9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-5A0A075B6B9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav6d-5A0A075B6B9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-5A0A075B6B9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-5A0A075B6B9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav6d-5A0A075B6B9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-5A0A075B6B9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-5A0A075B6B9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-5A0A075B6B9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav6d-5A0A075B6B9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-5A0A075B6B9 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.91■□□□□ 0.14
Trav6d-5A0A075B6B9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-5A0A075B6B9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-5A0A075B6B9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav6d-5A0A075B6B9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-5A0A075B6B9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav6d-5A0A075B6B9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-5A0A075B6B9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav6d-5A0A075B6B9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-5A0A075B6B9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav6d-5A0A075B6B9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.9■□□□□ 0.14
Trav6d-5A0A075B6B9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-5A0A075B6B9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-5A0A075B6B9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-5A0A075B6B9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-5A0A075B6B9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trav6d-5A0A075B6B9 Mir6236-201ENSMUST00000184437 123 ntBASIC15.9■□□□□ 0.14
Trav6d-5A0A075B6B9 Gm7143-201ENSMUST00000222811 859 ntBASIC15.9■□□□□ 0.14
Trav6d-5A0A075B6B9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-5A0A075B6B9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-5A0A075B6B9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-5A0A075B6B9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav6d-5A0A075B6B9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-5A0A075B6B9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-5A0A075B6B9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.89■□□□□ 0.13
Trav6d-5A0A075B6B9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-5A0A075B6B9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav6d-5A0A075B6B9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-5A0A075B6B9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Trav6d-5A0A075B6B9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-5A0A075B6B9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-5A0A075B6B9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-5A0A075B6B9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-5A0A075B6B9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav6d-5A0A075B6B9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-5A0A075B6B9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-5A0A075B6B9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-5A0A075B6B9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-5A0A075B6B9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav6d-5A0A075B6B9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-5A0A075B6B9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-5A0A075B6B9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
Trav6d-5A0A075B6B9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-5A0A075B6B9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-5A0A075B6B9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.87■□□□□ 0.13
Trav6d-5A0A075B6B9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav6d-5A0A075B6B9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav6d-5A0A075B6B9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-5A0A075B6B9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-5A0A075B6B9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trav6d-5A0A075B6B9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-5A0A075B6B9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6d-5A0A075B6B9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-5A0A075B6B9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-5A0A075B6B9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.86■□□□□ 0.13
Trav6d-5A0A075B6B9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-5A0A075B6B9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-5A0A075B6B9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-5A0A075B6B9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-5A0A075B6B9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-5A0A075B6B9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-5A0A075B6B9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6d-5A0A075B6B9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trav6d-5A0A075B6B9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-5A0A075B6B9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-5A0A075B6B9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-5A0A075B6B9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav6d-5A0A075B6B9 Gm10399-202ENSMUST00000202768 748 ntBASIC15.85■□□□□ 0.13
Trav6d-5A0A075B6B9 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.85■□□□□ 0.13
Trav6d-5A0A075B6B9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-5A0A075B6B9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-5A0A075B6B9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6d-5A0A075B6B9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms