Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3-4A0A075B654 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3-4A0A075B654 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3-4A0A075B654 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav3-4A0A075B654 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav3-4A0A075B654 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav3-4A0A075B654 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Trav3-4A0A075B654 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav3-4A0A075B654 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.27□□□□□ -0.28
Trav3-4A0A075B654 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav3-4A0A075B654 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-4A0A075B654 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-4A0A075B654 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-4A0A075B654 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-4A0A075B654 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-4A0A075B654 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-4A0A075B654 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-4A0A075B654 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-4A0A075B654 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-4A0A075B654 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trav3-4A0A075B654 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-4A0A075B654 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-4A0A075B654 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav3-4A0A075B654 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Trav3-4A0A075B654 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-4A0A075B654 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav3-4A0A075B654 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav3-4A0A075B654 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav3-4A0A075B654 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trav3-4A0A075B654 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav3-4A0A075B654 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-4A0A075B654 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-4A0A075B654 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Trav3-4A0A075B654 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-4A0A075B654 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav3-4A0A075B654 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-4A0A075B654 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav3-4A0A075B654 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-4A0A075B654 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav3-4A0A075B654 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav3-4A0A075B654 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav3-4A0A075B654 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-4A0A075B654 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-4A0A075B654 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav3-4A0A075B654 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-4A0A075B654 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-4A0A075B654 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-4A0A075B654 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-4A0A075B654 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Gm12818-201ENSMUST00000117562 1349 ntBASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms