Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav4-4-dv10A0A075B651 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4-4-dv10A0A075B651 Gm10232-201ENSMUST00000089221 720 ntBASIC15.38■□□□□ 0.05
Trav4-4-dv10A0A075B651 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4-4-dv10A0A075B651 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4-4-dv10A0A075B651 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4-4-dv10A0A075B651 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-4-dv10A0A075B651 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-4-dv10A0A075B651 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-4-dv10A0A075B651 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-4-dv10A0A075B651 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav4-4-dv10A0A075B651 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Trav4-4-dv10A0A075B651 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-4-dv10A0A075B651 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-4-dv10A0A075B651 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-4-dv10A0A075B651 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-4-dv10A0A075B651 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-4-dv10A0A075B651 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4-4-dv10A0A075B651 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-4-dv10A0A075B651 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.36■□□□□ 0.05
Trav4-4-dv10A0A075B651 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.36■□□□□ 0.05
Trav4-4-dv10A0A075B651 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-4-dv10A0A075B651 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-4-dv10A0A075B651 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-4-dv10A0A075B651 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-4-dv10A0A075B651 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-4-dv10A0A075B651 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav4-4-dv10A0A075B651 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav4-4-dv10A0A075B651 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav4-4-dv10A0A075B651 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-4-dv10A0A075B651 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-4-dv10A0A075B651 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-4-dv10A0A075B651 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-4-dv10A0A075B651 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-4-dv10A0A075B651 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-4-dv10A0A075B651 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-4-dv10A0A075B651 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-4-dv10A0A075B651 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav4-4-dv10A0A075B651 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4-4-dv10A0A075B651 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav4-4-dv10A0A075B651 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4-4-dv10A0A075B651 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4-4-dv10A0A075B651 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4-4-dv10A0A075B651 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4-4-dv10A0A075B651 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4-4-dv10A0A075B651 Gm13238-201ENSMUST00000117655 780 ntBASIC15.35■□□□□ 0.05
Trav4-4-dv10A0A075B651 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Trav4-4-dv10A0A075B651 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4-4-dv10A0A075B651 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4-4-dv10A0A075B651 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.34■□□□□ 0.05
Trav4-4-dv10A0A075B651 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav4-4-dv10A0A075B651 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4-4-dv10A0A075B651 Gm5921-201ENSMUST00000075898 882 ntBASIC15.34■□□□□ 0.05
Trav4-4-dv10A0A075B651 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4-4-dv10A0A075B651 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4-4-dv10A0A075B651 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4-4-dv10A0A075B651 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav4-4-dv10A0A075B651 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4-4-dv10A0A075B651 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4-4-dv10A0A075B651 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4-4-dv10A0A075B651 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav4-4-dv10A0A075B651 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4-4-dv10A0A075B651 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4-4-dv10A0A075B651 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4-4-dv10A0A075B651 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.32■□□□□ 0.04
Trav4-4-dv10A0A075B651 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4-4-dv10A0A075B651 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4-4-dv10A0A075B651 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4-4-dv10A0A075B651 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4-4-dv10A0A075B651 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav4-4-dv10A0A075B651 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4-4-dv10A0A075B651 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4-4-dv10A0A075B651 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4-4-dv10A0A075B651 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav4-4-dv10A0A075B651 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.32■□□□□ 0.04
Trav4-4-dv10A0A075B651 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4-4-dv10A0A075B651 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4-4-dv10A0A075B651 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav4-4-dv10A0A075B651 Gm43530-201ENSMUST00000195920 274 ntBASIC15.31■□□□□ 0.04
Trav4-4-dv10A0A075B651 Gm40881-201ENSMUST00000223397 166 ntBASIC15.31■□□□□ 0.04
Trav4-4-dv10A0A075B651 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-4-dv10A0A075B651 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav4-4-dv10A0A075B651 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-4-dv10A0A075B651 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-4-dv10A0A075B651 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Trav4-4-dv10A0A075B651 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-4-dv10A0A075B651 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-4-dv10A0A075B651 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav4-4-dv10A0A075B651 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav4-4-dv10A0A075B651 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Trav4-4-dv10A0A075B651 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-4-dv10A0A075B651 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-4-dv10A0A075B651 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4-4-dv10A0A075B651 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4-4-dv10A0A075B651 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4-4-dv10A0A075B651 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav4-4-dv10A0A075B651 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4-4-dv10A0A075B651 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4-4-dv10A0A075B651 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Trav4-4-dv10A0A075B651 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms