Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-3A0A075B648 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-3A0A075B648 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-3A0A075B648 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-3A0A075B648 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-3A0A075B648 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-3A0A075B648 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-3A0A075B648 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav12-3A0A075B648 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav12-3A0A075B648 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav12-3A0A075B648 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12-3A0A075B648 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav12-3A0A075B648 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12-3A0A075B648 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12-3A0A075B648 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12-3A0A075B648 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav12-3A0A075B648 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12-3A0A075B648 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12-3A0A075B648 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12-3A0A075B648 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12-3A0A075B648 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12-3A0A075B648 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav12-3A0A075B648 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12-3A0A075B648 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12-3A0A075B648 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC14.41□□□□□ -0.1
Trav12-3A0A075B648 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav12-3A0A075B648 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav12-3A0A075B648 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-3A0A075B648 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-3A0A075B648 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-3A0A075B648 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-3A0A075B648 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-3A0A075B648 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-3A0A075B648 Gm4799-201ENSMUST00000095396 657 ntBASIC14.4□□□□□ -0.1
Trav12-3A0A075B648 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-3A0A075B648 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-3A0A075B648 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.4□□□□□ -0.1
Trav12-3A0A075B648 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav12-3A0A075B648 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.4□□□□□ -0.1
Trav12-3A0A075B648 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
Trav12-3A0A075B648 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-3A0A075B648 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-3A0A075B648 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-3A0A075B648 BC021767-201ENSMUST00000126387 1716 ntBASIC14.39□□□□□ -0.11
Trav12-3A0A075B648 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav12-3A0A075B648 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC14.39□□□□□ -0.11
Trav12-3A0A075B648 AC116713.1-201ENSMUST00000215074 430 ntBASIC14.39□□□□□ -0.11
Trav12-3A0A075B648 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-3A0A075B648 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-3A0A075B648 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-3A0A075B648 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-3A0A075B648 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-3A0A075B648 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav12-3A0A075B648 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-3A0A075B648 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-3A0A075B648 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-3A0A075B648 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-3A0A075B648 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-3A0A075B648 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav12-3A0A075B648 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trav12-3A0A075B648 Nkain2-201ENSMUST00000092602 558 ntBASIC14.38□□□□□ -0.11
Trav12-3A0A075B648 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-3A0A075B648 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-3A0A075B648 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-3A0A075B648 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-3A0A075B648 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-3A0A075B648 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-3A0A075B648 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-3A0A075B648 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-3A0A075B648 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-3A0A075B648 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-3A0A075B648 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-3A0A075B648 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-3A0A075B648 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-3A0A075B648 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav12-3A0A075B648 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-3A0A075B648 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav12-3A0A075B648 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-3A0A075B648 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-3A0A075B648 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-3A0A075B648 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-3A0A075B648 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-3A0A075B648 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-3A0A075B648 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-3A0A075B648 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-3A0A075B648 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-3A0A075B648 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav12-3A0A075B648 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav12-3A0A075B648 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav12-3A0A075B648 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-3A0A075B648 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-3A0A075B648 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.36□□□□□ -0.11
Trav12-3A0A075B648 Gm12818-201ENSMUST00000117562 1349 ntBASIC14.36□□□□□ -0.11
Trav12-3A0A075B648 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav12-3A0A075B648 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-3A0A075B648 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav12-3A0A075B648 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-3A0A075B648 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-3A0A075B648 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-3A0A075B648 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms