Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trav8-1A0A075B641 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav8-1A0A075B641 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8-1A0A075B641 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav8-1A0A075B641 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.12□□□□□ -0.15
Trav8-1A0A075B641 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8-1A0A075B641 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8-1A0A075B641 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8-1A0A075B641 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Trav8-1A0A075B641 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8-1A0A075B641 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav8-1A0A075B641 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8-1A0A075B641 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8-1A0A075B641 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8-1A0A075B641 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav8-1A0A075B641 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC14.12□□□□□ -0.15
Trav8-1A0A075B641 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8-1A0A075B641 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8-1A0A075B641 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8-1A0A075B641 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav8-1A0A075B641 Gm44428-201ENSMUST00000204474 874 ntBASIC14.11□□□□□ -0.15
Trav8-1A0A075B641 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8-1A0A075B641 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8-1A0A075B641 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8-1A0A075B641 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav8-1A0A075B641 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8-1A0A075B641 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Trav8-1A0A075B641 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8-1A0A075B641 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav8-1A0A075B641 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8-1A0A075B641 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8-1A0A075B641 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.1□□□□□ -0.15
Trav8-1A0A075B641 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8-1A0A075B641 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8-1A0A075B641 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8-1A0A075B641 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8-1A0A075B641 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Trav8-1A0A075B641 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8-1A0A075B641 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8-1A0A075B641 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8-1A0A075B641 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav8-1A0A075B641 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8-1A0A075B641 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8-1A0A075B641 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8-1A0A075B641 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8-1A0A075B641 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8-1A0A075B641 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.09□□□□□ -0.15
Trav8-1A0A075B641 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8-1A0A075B641 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav8-1A0A075B641 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8-1A0A075B641 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8-1A0A075B641 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8-1A0A075B641 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8-1A0A075B641 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav8-1A0A075B641 AC117769.4-201ENSMUST00000225679 685 ntBASIC14.09□□□□□ -0.15
Trav8-1A0A075B641 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8-1A0A075B641 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8-1A0A075B641 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8-1A0A075B641 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8-1A0A075B641 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8-1A0A075B641 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8-1A0A075B641 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trav8-1A0A075B641 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8-1A0A075B641 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8-1A0A075B641 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8-1A0A075B641 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav8-1A0A075B641 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trav8-1A0A075B641 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Trav8-1A0A075B641 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8-1A0A075B641 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8-1A0A075B641 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8-1A0A075B641 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav8-1A0A075B641 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8-1A0A075B641 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav8-1A0A075B641 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8-1A0A075B641 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8-1A0A075B641 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8-1A0A075B641 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8-1A0A075B641 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8-1A0A075B641 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav8-1A0A075B641 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8-1A0A075B641 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8-1A0A075B641 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8-1A0A075B641 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8-1A0A075B641 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8-1A0A075B641 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav8-1A0A075B641 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8-1A0A075B641 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav8-1A0A075B641 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8-1A0A075B641 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav8-1A0A075B641 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8-1A0A075B641 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8-1A0A075B641 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8-1A0A075B641 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8-1A0A075B641 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8-1A0A075B641 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8-1A0A075B641 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8-1A0A075B641 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Trav8-1A0A075B641 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.06□□□□□ -0.16
Trav8-1A0A075B641 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms