Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.77■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.77■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Gm7143-201ENSMUST00000222811 859 ntBASIC16.77■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.76■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Gm43566-201ENSMUST00000196851 808 ntBASIC16.75■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.75■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.73■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.73■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.73■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.73■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.72■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.71■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav15d-1-dv6d-1A0A075B624 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav15d-1-dv6d-1A0A075B624 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms