Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.86■□□□□ 0.13
Trav6-1A0A075B5Z8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.86■□□□□ 0.13
Trav6-1A0A075B5Z8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav6-1A0A075B5Z8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav6-1A0A075B5Z8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Trav6-1A0A075B5Z8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-1A0A075B5Z8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.85■□□□□ 0.13
Trav6-1A0A075B5Z8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav6-1A0A075B5Z8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-1A0A075B5Z8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.85■□□□□ 0.13
Trav6-1A0A075B5Z8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-1A0A075B5Z8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav6-1A0A075B5Z8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Trav6-1A0A075B5Z8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav6-1A0A075B5Z8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-1A0A075B5Z8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-1A0A075B5Z8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-1A0A075B5Z8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-1A0A075B5Z8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-1A0A075B5Z8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-1A0A075B5Z8 Gm13238-201ENSMUST00000117655 780 ntBASIC15.84■□□□□ 0.13
Trav6-1A0A075B5Z8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trav6-1A0A075B5Z8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav6-1A0A075B5Z8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-1A0A075B5Z8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-1A0A075B5Z8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-1A0A075B5Z8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-1A0A075B5Z8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-1A0A075B5Z8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav6-1A0A075B5Z8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6-1A0A075B5Z8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6-1A0A075B5Z8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6-1A0A075B5Z8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav6-1A0A075B5Z8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.83■□□□□ 0.13
Trav6-1A0A075B5Z8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-1A0A075B5Z8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Trav6-1A0A075B5Z8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Trav6-1A0A075B5Z8 Gm10232-201ENSMUST00000089221 720 ntBASIC15.83■□□□□ 0.12
Trav6-1A0A075B5Z8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-1A0A075B5Z8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-1A0A075B5Z8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-1A0A075B5Z8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-1A0A075B5Z8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.83■□□□□ 0.12
Trav6-1A0A075B5Z8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trav6-1A0A075B5Z8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-1A0A075B5Z8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav6-1A0A075B5Z8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-1A0A075B5Z8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-1A0A075B5Z8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-1A0A075B5Z8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav6-1A0A075B5Z8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-1A0A075B5Z8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-1A0A075B5Z8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-1A0A075B5Z8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trav6-1A0A075B5Z8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-1A0A075B5Z8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-1A0A075B5Z8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav6-1A0A075B5Z8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-1A0A075B5Z8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav6-1A0A075B5Z8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav6-1A0A075B5Z8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav6-1A0A075B5Z8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trav6-1A0A075B5Z8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-1A0A075B5Z8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav6-1A0A075B5Z8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-1A0A075B5Z8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.82■□□□□ 0.12
Trav6-1A0A075B5Z8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-1A0A075B5Z8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav6-1A0A075B5Z8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-1A0A075B5Z8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-1A0A075B5Z8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-1A0A075B5Z8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-1A0A075B5Z8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav6-1A0A075B5Z8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-1A0A075B5Z8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-1A0A075B5Z8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav6-1A0A075B5Z8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-1A0A075B5Z8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-1A0A075B5Z8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-1A0A075B5Z8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-1A0A075B5Z8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav6-1A0A075B5Z8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-1A0A075B5Z8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav6-1A0A075B5Z8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav6-1A0A075B5Z8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav6-1A0A075B5Z8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav6-1A0A075B5Z8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-1A0A075B5Z8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-1A0A075B5Z8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-1A0A075B5Z8 Gm43530-201ENSMUST00000195920 274 ntBASIC15.79■□□□□ 0.12
Trav6-1A0A075B5Z8 Gm5921-201ENSMUST00000075898 882 ntBASIC15.79■□□□□ 0.12
Trav6-1A0A075B5Z8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-1A0A075B5Z8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-1A0A075B5Z8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav6-1A0A075B5Z8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-1A0A075B5Z8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav6-1A0A075B5Z8 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.78■□□□□ 0.12
Trav6-1A0A075B5Z8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-1A0A075B5Z8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-1A0A075B5Z8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms